KEGG   Huiozyma naganishii: KNAG_0H01290
Entry
KNAG_0H01290      CDS       T08174                                 
Symbol
KNAG0H01290
Name
(RefSeq) hypothetical protein
  KO
K10570  DNA excision repair protein ERCC-8
Organism
kng  Huiozyma naganishii
Pathway
kng03420  Nucleotide excision repair
kng04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:kng00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    KNAG_0H01290 (KNAG0H01290)
  09124 Replication and repair
   03420 Nucleotide excision repair
    KNAG_0H01290 (KNAG0H01290)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:kng04121]
    KNAG_0H01290 (KNAG0H01290)
   03400 DNA repair and recombination proteins [BR:kng03400]
    KNAG_0H01290 (KNAG0H01290)
Ubiquitin system [BR:kng04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     KNAG_0H01290 (KNAG0H01290)
DNA repair and recombination proteins [BR:kng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      KNAG_0H01290 (KNAG0H01290)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR11_1st Beta-prop_IFT140_1st Beta-prop_Vps41
Other DBs
NCBI-GeneID: 34527274
NCBI-ProteinID: XP_022465787
UniProt: J7S1N8
LinkDB
Position
8:227947..229341
AA seq 464 aa
MLQNLFEQYRLGFLTPGQFTARNAISQFETLVENHQVIKYRPTATHAHVRPTITSLDVDS
HSGGRHLLSGGDDGGVSLWGVDESSTSGGTLRCKRLRVSRRDTRHNAVVPRGARTTDDTR
LVHSFETSANKFRMYRGSRPAAVPPGEADAQSAHQFRVTSVKWYGSDNGMFFSGGNDRTV
KIWDTNTFECVQDLALGYVVNQLDCTNNSLNSVLVASDDYYPRMIDLRNMNMGVTIFGKG
SQRGVPMKHEILTCKMDPAREYIVASGDSSGSVKVWDLRQTNNLLVQLSRGGDSAHRASC
VDICWNHEGTKLASVSLDGTIVLWDPFDNNRYVNNFSDRENMNPFAESEHPHFKQLGETD
RTRVRHARRTSQRLQWVAGKYLAVNTDLGELQVYDTVQGKYWNKIEFPHDEGATVGRAGQ
FTGLAITEDMTNGIGLRLFAGATQRARDPQGIAPAASYLVEIRP
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgctccagaacctgttcgaacagtaccgtctcggcttcttgacaccgggacaattcacc
gctcgcaacgcaatatcccagtttgaaacactggtagagaaccaccaagtgatcaagtac
cgtcccacagcaacccatgcccacgtaagacccacaatcacatccctggatgtagactct
cactcggggggcagacacttgctcagtggtggtgacgacggcggcgtctcactgtggggg
gttgatgagtcctcgaccagtggcgggactctccgatgcaagaggttgcgtgtgtccagg
agggatacgagacacaacgcggtggtgccacggggggcgcggaccactgatgatacgaga
ctcgtacacagtttcgagactagtgcaaacaagttcagaatgtacagggggagccggcca
gcggcggtgccgccaggggaggcggatgcgcaaagtgcacaccagttccgcgtcacgtcg
gtgaaatggtacggtagtgacaacgggatgttcttctccggtgggaacgacaggacagtg
aagatctgggacacgaacacgtttgagtgcgtgcaggatttggcgctagggtacgtcgtg
aaccaactcgactgcacgaacaactcactcaatagcgtccttgtcgcatcggatgattac
tacccgaggatgatcgacttgaggaacatgaacatgggggtcactatattcggtaagggc
tcacagcggggggtacccatgaaacacgagatactcacttgtaagatggacccggcgagg
gagtacatcgtcgcctcgggggattccagcgggagtgttaaagtttgggatcttagacag
accaataacctcttggtgcagctttcgaggggtggtgactcggcgcatagggccagctgt
gttgacatatgttggaaccacgagggcacgaaactcgcctcggtctcgctggatgggacc
atcgtcttgtgggatcccttcgacaacaacaggtacgtgaacaacttctcagatagagag
aacatgaacccgtttgctgaatcggaacacccacatttcaaacagcttggtgaaacggat
aggacccgcgtgcggcacgcgagaagaacgtcgcagcggctccagtgggtcgctgggaag
tacctcgctgtcaacacggacttgggagaattgcaagtctacgatacggttcaagggaaa
tactggaacaaaatcgagttcccacacgacgagggggccacagtggggcgtgcgggccaa
ttcacagggttggccatcactgaagacatgaccaacggcattggattgcggttgtttgct
ggagctacgcaacgcgcgagagaccctcagggtattgctcccgcagcttcgtacctggta
gagatccgcccatag

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