Huiozyma naganishii: KNAG_0I00680
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Entry
KNAG_0I00680 CDS
T08174
Symbol
KNAG0I00680
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
kng
Huiozyma naganishii
Pathway
kng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KNAG_0I00680 (KNAG0I00680)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kng03019
]
KNAG_0I00680 (KNAG0I00680)
Messenger RNA biogenesis [BR:
kng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
KNAG_0I00680 (KNAG0I00680)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
KNAG_0I00680 (KNAG0I00680)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
34527602
NCBI-ProteinID:
XP_022466104
UniProt:
J7S915
LinkDB
All DBs
Position
9:complement(120059..120844)
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AA seq
261 aa
AA seq
DB search
MSLSIAEESFLYDSLSGPQRLRPDGRLPHQFRPVEVFTDFLPSSDGSSRVIASDGSECIV
SVKCKVVDHTVEPDLIQVDVDIAGERDDSLLVESIASLLNKLIGTVDHARLQLTKKYSFK
IFIDVLVLSSFSYPISLISFGVYFAVSATQLPKLVSNFDDLEVEELPMFDDYDLVPLEMR
TPLVFTLALVGKNVFLDPAANESAVANNGLVVSWSAGTVVAPLRTIALNNTHVTGFDPEL
LQVGIKLVEQHAPGIVHALEG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgtccattgctgaggaatctttcctgtacgattcgctttctggtccgcagagg
cttcggccggacgggcgacttccacaccagttccgccccgtcgaggtattcaccgacttc
ctgccgagctctgacgggtcctcgcgggttatagcgagcgacgggagcgagtgtatcgtg
agtgtgaagtgcaaagtggtcgaccacaccgtggagcccgatctgattcaagtggacgtg
gacattgcaggggagcgcgacgactctttgctcgtggagagcattgcctctctgctgaac
aagctgattggcacagttgaccacgcaaggctgcagttgacgaagaaatacagttttaag
atattcatcgacgtgctcgtgttgtcgtcgttctcgtacccgatctcgctgatctcgttc
ggggtctactttgcggtcagcgcaacacaattacccaaacttgtctcgaacttcgacgac
ctcgaagtggaggagctgccgatgttcgacgactacgaccttgtcccgctcgagatgcgt
acgccgctcgtgttcacgctcgcacttgtagggaaaaacgtgttcttggaccccgcggcg
aacgagagcgccgtcgcgaacaacggactcgtcgttagctggtctgcgggcaccgtcgtc
gcacccctcagaactatcgccctgaacaacacacacgtcactggattcgatccagaactg
ctacaagtgggcatcaaactcgtggagcagcatgccccgggcattgtccatgccctcgag
ggttaa
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