Huiozyma naganishii: KNAG_0M01280
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Entry
KNAG_0M01280 CDS
T08174
Symbol
KNAG0M01280
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
kng
Huiozyma naganishii
Pathway
kng03018
RNA degradation
kng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KNAG_0M01280 (KNAG0M01280)
09123 Folding, sorting and degradation
03018 RNA degradation
KNAG_0M01280 (KNAG0M01280)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kng03019
]
KNAG_0M01280 (KNAG0M01280)
03041 Spliceosome [BR:
kng03041
]
KNAG_0M01280 (KNAG0M01280)
Messenger RNA biogenesis [BR:
kng03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KNAG_0M01280 (KNAG0M01280)
mRNA degradation factors
5'-3' decay
Lsm complex
KNAG_0M01280 (KNAG0M01280)
Spliceosome [BR:
kng03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
KNAG_0M01280 (KNAG0M01280)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
34528761
NCBI-ProteinID:
XP_022467225
UniProt:
J7SBE4
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All DBs
Position
13:complement(234866..235174)
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AA seq
102 aa
AA seq
DB search
MSPLLKEYLNRDVVVVLTSGCVQQATLVGFDKNVNLLLWTAGQHCVRVLRGSEVVCVGLC
PANTTATTGETAVDEGERYYADTKNNVPQEHLIWAQVWNRRD
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgctgttgaaggagtacctgaatcgggacgtcgtcgtggtgctgacgagcggg
tgcgtgcagcaggcgacgcttgtcgggttcgacaagaacgtgaacctgctgctgtggacc
gctggtcagcactgtgtgcgtgttctgcgcgggtctgaggtggtctgtgttgggctgtgt
cctgcaaacaccaccgccaccactggggaaacagcagtagatgagggggaacggtactac
gccgacacgaagaacaacgtaccacaggaacacctcatatgggcacaagtatggaaccga
agagattga
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