KEGG   Huiozyma naganishii: KNAG_0M01280
Entry
KNAG_0M01280      CDS       T08174                                 
Symbol
KNAG0M01280
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
kng  Huiozyma naganishii
Pathway
kng03018  RNA degradation
kng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    KNAG_0M01280 (KNAG0M01280)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KNAG_0M01280 (KNAG0M01280)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kng03019]
    KNAG_0M01280 (KNAG0M01280)
   03041 Spliceosome [BR:kng03041]
    KNAG_0M01280 (KNAG0M01280)
Messenger RNA biogenesis [BR:kng03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     KNAG_0M01280 (KNAG0M01280)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     KNAG_0M01280 (KNAG0M01280)
Spliceosome [BR:kng03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    KNAG_0M01280 (KNAG0M01280)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 34528761
NCBI-ProteinID: XP_022467225
UniProt: J7SBE4
LinkDB
Position
13:complement(234866..235174)
AA seq 102 aa
MSPLLKEYLNRDVVVVLTSGCVQQATLVGFDKNVNLLLWTAGQHCVRVLRGSEVVCVGLC
PANTTATTGETAVDEGERYYADTKNNVPQEHLIWAQVWNRRD
NT seq 309 nt   +upstreamnt  +downstreamnt
atgagcccgctgttgaaggagtacctgaatcgggacgtcgtcgtggtgctgacgagcggg
tgcgtgcagcaggcgacgcttgtcgggttcgacaagaacgtgaacctgctgctgtggacc
gctggtcagcactgtgtgcgtgttctgcgcgggtctgaggtggtctgtgttgggctgtgt
cctgcaaacaccaccgccaccactggggaaacagcagtagatgagggggaacggtactac
gccgacacgaagaacaacgtaccacaggaacacctcatatgggcacaagtatggaaccga
agagattga

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