Knoellia sp. S7-12: V6K52_04450
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Entry
V6K52_04450 CDS
T10549
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
kno Knoellia sp. S7-12
Pathway
kno00860
Porphyrin metabolism
kno01100
Metabolic pathways
kno01110
Biosynthesis of secondary metabolites
kno01120
Microbial metabolism in diverse environments
kno01240
Biosynthesis of cofactors
Module
kno_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
kno_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
kno00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
V6K52_04450 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kno04147
]
V6K52_04450 (hemB)
Enzymes [BR:
kno01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
V6K52_04450 (hemB)
Exosome [BR:
kno04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
V6K52_04450 (hemB)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
XAU41347
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Position
939360..940322
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AA seq
320 aa
AA seq
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MPLRPRRLRQSAAVRRLVAQTRLHPADLVLPVFVREGIDEPQPIEAMPGVVQHTLDSLVA
EAHRCVKAGLGGIMLFGVPESKDAVGSGADADDGILNVALRAVVDAVGDSLVVMADLCLD
EFTDHGHCGVVDAEGRVDNDATLDRYAAMALAQARTGAHVLGLSGMMDGQVAHVREALDE
AGFADTIILAYAAKYTSALYGPFREAVQSSLVGDRASYQQDSANATEALREIELDLAEGA
DIIMIKPAQTHLDIIALAAEMSPVPVAAYQISGEYSQIKAAAERGWIDGDRAVLESLLHI
RRAGAQIILTYSALDVANRI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atcccgttgcgtcctcgacggctgcgtcagtcggcggcggtgcgtcggctcgtcgcgcag
acgcggctccaccccgccgatctcgtgctgcccgtcttcgtccgtgagggcatcgacgag
ccgcagcccatcgaggccatgccgggcgtcgtccagcacacgctggactcgctcgtcgct
gaggcgcaccggtgcgtcaaggctggcctcggcgggatcatgctcttcggcgtgccggag
tccaaggacgcggtcggctcaggtgccgacgccgatgacggcatcctcaacgtcgccctg
cgggccgtcgtcgacgccgtcggtgactcactcgtcgtcatggccgatctgtgcctcgac
gagttcaccgaccacggtcactgcggggtggtggatgctgaaggtcgcgttgacaacgac
gccacgctcgaccgctacgccgcgatggcgctcgcgcaggctcgcacgggtgcccacgtc
cttggactgagcgggatgatggacgggcaggtggcccacgtgcgcgaggcgctcgatgag
gccggcttcgccgacacgatcatcctggcgtatgccgcgaagtacacctccgcgctctac
ggcccgttccgtgaggcggtgcagtcctccttggtcggggaccgtgcgagctatcagcag
gactcggccaacgcgaccgaggcgctgcgcgagatcgagctcgacctcgccgagggcgcc
gacatcatcatgatcaagccggcgcagacgcatctcgacatcatcgcgctggcggcggag
atgtcaccggtgccggtggcggcctatcagatctcgggggagtactcccagatcaaggca
gcggccgagcgcggctggatcgacggtgaccgggcggtcctcgagtcgctgctgcacatc
cggcgggcgggagcgcagatcatcctgacctacagcgccctcgacgtcgccaaccgcatc
tga
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