Knoellia sp. S7-12: V6K52_06095
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Entry
V6K52_06095 CDS
T10549
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kno Knoellia sp. S7-12
Pathway
kno03420
Nucleotide excision repair
kno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V6K52_06095
03430 Mismatch repair
V6K52_06095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kno03400
]
V6K52_06095
Enzymes [BR:
kno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V6K52_06095
DNA repair and recombination proteins [BR:
kno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V6K52_06095
MMR (mismatch excision repair)
Other MMR factors
V6K52_06095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
XAU40627
LinkDB
All DBs
Position
1265562..1268900
Genome browser
AA seq
1112 aa
AA seq
DB search
MSTTSTSDAPAGAVAGVRWSAAAVAEAIGLPHRPTPEQTAVIEAPLRPLLVIAGAGSGKT
ETMAARVVWLVANGFVEPEDVLGLTFTRKAATELSDRIGNRLAQLRRVGLWTPQEVDGAP
SLGAAVSVSTYHSYAGRLVREHGLRLGYEADTRLLSEAAAWQTAHEAVARYDGPMDEVDK
AESTVTAAVVDLAGEMAEHLQTPATVAAHLDRVIDHLEQLERGDTKKRVNPLAAELTNLR
LRRAVLPIVDRYAQLKRSRDAMDFADQMALAARLSMTFDDIGAIERARHRVVLLDEFQDT
SEAQLALLKALYVAPGETSAVTAVGDPHQSIYGWRGASATTLTRFAVEFGDPEPARKLDL
STSWRNDSAILDVANHLARPLRAASRVPVEPLSSRPGAGGGSVEVARLLTAADEADHIAL
WLAAHRSRGAVSAAVLCRKRAEFATVTAALEEHGIPHEVVGLGGLLLTPEVEDVVALLHV
VQDPARGDHLIRLLSGPMMRLGIADLDALAAWSRVQQRQRGGAVARHERDLAPDAADAPS
IIEALDALPPRGWVGDEGERLGDVARDRLAGLAATVRRMRGLTFLPLADLVLEAEKALGL
DIEVLSRPEYTPAAARAHLDAFGDVAAQFSQSADRATLGGFLDWIKAAIDEERGLDRGYA
DATSDAVQVMTIHAAKGLEWDVVAVPALVESTFPAHNLHSPSFKNGEWRISAPKDKGWLA
GLQDGGLPYELRGDRDGLPEFGWQSAIGWDELATRLEEFAVAGGEHAIAEERRLAYVAST
RARHALLLTASVWSRPKTPRVTSRFLDEVMALSATEGGSSRARVGVWTDLPEPPDDGSSV
VKPGTEDGHEFAWPVDHLGHRRVRADAAARAVTEAVTVAPGTGGAADAGPWARELEVLLA
ERASRQARHDDVVELPSHLSTSSLVSFASDPERFAAELRRPMPSAPAGAARRGTAFHAWV
EEHYARAAIVDLFDLPGSADDDPMGDEELPAMRERFLASPWAAREPVEIETALETVVDGV
AIRGRIDAVFADVEGAEWVIVDWKTGRRPSGEVARMRALQLAAYRIAWARLRGIDPERVS
GAFYYAGTGETVWPDLADEVEISDLLAGVPRA
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacgagcacctcggatgcgccggcaggcgcggttgcaggtgtgcggtggtcg
gctgcggccgtcgccgaagccatcggcctgccgcaccgccccacccccgaacagaccgcg
gtcatcgaggcaccactacgtcctctcctcgtcatcgcgggcgcgggctcgggcaagacc
gagacgatggccgcgagggtcgtgtggctcgtggccaacgggtttgtcgagcccgaggac
gtgctcggcctcaccttcacccgcaaggcagccaccgagctctccgaccgcatcggcaac
cgcctcgcccagctgcgccgtgtcgggctatggaccccccaggaggtcgacggcgcaccg
tcgctcggggcagccgtgagcgtgtcgacctaccactcgtatgccggtcggctcgtgcgc
gagcacggtctccgccttggctacgaggcagacacgcgactgctctccgaggccgccgcc
tggcagacagcgcacgaggccgtcgcgcgctatgacgggcccatggacgaggtcgacaag
gccgagtccaccgtcaccgcggccgtcgtggacctcgctggcgagatggcggagcacctc
caaacaccggcaaccgttgcagcgcacttggatcgagtcatcgatcaccttgagcagctc
gagcgaggagacaccaagaagcgggtcaaccccctggccgccgaactcacgaacctgcga
cttcgacgagctgtgctgcccatcgtcgaccgctacgcccagctcaagcgcagtcgtgac
gcgatggacttcgccgaccagatggcgctcgcagcacgcctttcgatgaccttcgacgac
atcggtgcgatcgagcgtgcccggcaccgcgtcgtgctgctcgacgagttccaggacacg
tccgaggcgcagctggcgctgctcaaggcgctctatgtcgcaccgggcgagacgtcggcc
gtcaccgcagtcggtgacccgcaccagtcgatctacgggtggcgtggggcgagcgcgacg
accctcacccggttcgcggtggagttcggcgaccccgagcctgcgcgcaagctcgacctg
tcgacgagctggcgcaacgacagcgcgatcctcgacgtggccaaccacctggcgcggccg
ctgcgcgcggcatcgcgagttcccgtcgagccactgtcgtcacgccctggtgcaggtggc
gggtccgtcgaggtcgcccgactgctcacagccgctgacgaggctgaccacatcgccctc
tggctcgccgcgcaccgttcacgaggggccgtgagtgctgcggtgctctgccgcaagcga
gccgagttcgccacggtgacagcggcactggaggaacacggcataccccacgaggtggtt
ggcctgggcggcctgctcctcacaccagaggtcgaggacgttgtcgcgctgctccatgtc
gtgcaggaccccgcgcgtggtgaccacctcatccggttgctctcgggtccgatgatgcga
ctcgggattgccgacctcgatgcccttgcggcatggtcgcgggtgcagcaacgccaacgc
gggggtgcggtggcccgtcacgagcgggacctcgctcccgatgccgccgacgcaccgagc
atcatcgaggcgctcgacgccctccctcctcgagggtgggtcggcgacgagggagagcgg
ctcggcgacgttgcccgcgaccggctggccggtcttgcggccaccgtgcggcggatgcgc
gggctcacctttctccccctggccgacctcgtcctcgaggccgagaaggcgctcggcctc
gacatcgaggtcttgtcgcggcccgaatacaccccggccgcggcgcgggcgcacctcgat
gccttcggtgatgtggccgcccagttctcgcagagcgctgaccgggcgaccctcggcggg
ttcctcgactggatcaaggcggccatcgacgaggagcgcggtctcgatcgtggctacgca
gacgcgacgtcggacgccgttcaggtcatgacgatccacgccgccaagggcctcgagtgg
gacgtcgtcgccgtgccggcgctggtcgagagcaccttccccgcccacaacctccattcg
ccgagcttcaagaatggggagtggcgcatctccgcgcccaaggacaagggttggctggcc
ggcctgcaggacggtgggctgccctacgaactgcgcggcgaccgtgacggtctgcctgag
ttcggctggcagagcgcgatcgggtgggacgaactcgccactcggctcgaggagtttgcc
gtcgccgggggcgagcacgcgatcgccgaggagcgtcggctcgcctacgtcgcctccacc
cgcgcccgccacgccttgctgctcacggccagcgtgtggagtcggcccaagacaccgcgc
gtgacctcacgcttcctcgacgaggtgatggccctctccgccaccgaaggcggctcgtcg
cgggcccgcgtcggtgtgtggacagatctgcccgagccgcccgacgacgggtcctccgtc
gtcaagcccggcacggaggatgggcacgagttcgcctggccggtcgaccacctgggtcac
cgtcgcgtgcgagcggatgcggctgcccgtgcggtgactgaggctgtcaccgtcgcgccg
ggcacaggtggggccgccgatgccggcccgtgggcacgtgagctggaggtcctgctcgcc
gaacgcgcgtcgcggcaggcgcgccacgacgatgtcgtcgagttgccctcccacctgtcg
acgtcgtccctcgtctccttcgcgagcgaccccgagcgattcgctgcagagctgcggcgg
cccatgccgtcggcgcccgccggggcggcccgccggggcacggctttccacgcctgggtg
gaggagcactacgcgcgcgccgcgatcgtcgatcttttcgatctcccgggcagcgccgac
gacgaccccatgggcgacgaagagctgccagccatgcgcgagcgattcctcgcgagcccg
tgggccgctcgagagccggtcgagatcgagacggcgctcgagaccgtggtcgatggtgtc
gccatccgtggccgcatcgatgccgtgttcgccgacgtcgagggcgcagagtgggtcatc
gtcgactggaagaccggacgccgcccctccggagaagtcgcgcggatgcgcgcactgcaa
ctcgcggcataccggattgcgtgggcgcgactacgcggcattgacccggagcgggtgagt
ggagcgttctactacgccggcacgggtgagacggtctggccagatctggcggacgaggtg
gagatcagcgaccttctcgcgggagttccccgggcgtga
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