Knoellia sp. S7-12: V6K52_07380
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Entry
V6K52_07380 CDS
T10549
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kno Knoellia sp. S7-12
Pathway
kno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6K52_07380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kno03019
]
V6K52_07380
03400 DNA repair and recombination proteins [BR:
kno03400
]
V6K52_07380
Enzymes [BR:
kno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V6K52_07380
Messenger RNA biogenesis [BR:
kno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V6K52_07380
DNA repair and recombination proteins [BR:
kno03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V6K52_07380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Phage_Coat_B
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XAU40866
LinkDB
All DBs
Position
complement(1528679..1530796)
Genome browser
AA seq
705 aa
AA seq
DB search
MTNASETTTLATDATTALRRLVGRDDVDFRDGQLEAITALVADRSRVLVVQRTGWGKSAV
YFVATALRRAEGAGPTVIISPLLALMRDQIAAAQRAGIRAVTMNSANAQDWDEVRQALAS
DSVDVLLVSPERLNNPRFRDEQLPDLARRCGLLVVDEAHCVSDWGHDFRPDYRRIRDLLT
ELPADVPVLATTATANARVVTDVVEQLGVGGRDVLTVRGGLARDSLRLGVLSSMSPEQRL
GWLLAHLDELPGSGIVYALTVAAAEEVAAALTEAGHRVSSYTGRTDPADRERLEGQLRDN
QVKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRATERADVLLLPGPEDK
DIWLYFASVSMPRQEQADAVLTALAEAGRPLSTAAIETIVDVRRTRLELLLKVLDVDGAV
TRVQGGWTGTGQPWTYDAERYARVAQSRSDEQQLMLDYELTTECRMAFLQRTLDDETAVP
CGKCDTCAGPWYATDIPDNVIGAARERLARVGVDLDPRAQWPTGMDRLGVPVKGKISLDE
ALSGGRALARLSDLGWGNRLRQVLREDAPATPELLRACVGVLAEWGWSQRPAGIVAMPSR
SHPQLVQSLAAGLAEIGRLPLLGTLDLQHGGPTGEPGGNSAFRLAGVWERLVVGPELAQT
LAGVRGPVLLVDDLVSSRWTLTVAGRGLRRAGADGVLPFTLAVDG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgcatctgagaccaccacgctcgccaccgatgcgacgacggccctgcgccgg
ctcgtcggacgcgacgacgtcgacttccgcgacgggcagctcgaggcgatcacggcgctc
gtcgcagaccggtcgcgcgtcctcgtcgtccagcgcacggggtggggcaagtcggcggtc
tacttcgtcgccaccgcgctgcgccgggctgagggtgccggaccgacggtcatcatctcc
cccttgctcgcgctcatgcgtgaccagatcgcggcggcccagcgggccggcatacgcgca
gtgacgatgaactccgccaatgcgcaggactgggacgaggtccgtcaggcgctggcctcc
gactccgtggacgtgctgctggtcagcccggaacggctcaacaacccccggttccgcgat
gagcagctgcccgacctcgcacggcgctgcggcctgctcgtcgtcgacgaggcgcactgc
gtctctgactggggccacgacttccgacctgactatcgccgcatccgcgacctgctcacc
gagctccccgccgacgtgcccgtgctcgccacgacggcgaccgcgaacgcgcgcgtggtc
accgacgtggtcgagcagctcggggtcggtgggcgcgacgtcctcacggttcgcggtggg
ttggcgcgtgactccctgcgactcggcgtgctgagctcgatgtcccccgagcagcggttg
gggtggctcctcgcgcacctcgacgagctgcccggcagcggcatcgtctatgcgttgact
gtggctgcagccgaagaggtcgcggccgccctcaccgaggctggtcaccgcgtgtcctcc
tataccggccgcacggaccccgccgaccgcgagcgcctcgagggccagctgcgagacaac
caggtcaaggccctcgtggcgacgtccgccctcgggatggggttcgacaagcccgacctg
gggtttgtcgtgcacctcggtgcgccgtcctcgcccgtcgcctactaccagcaggtcggg
cgtgctggtcgtgccaccgagcgcgccgacgtgctcctcctgcccggccccgaggacaag
gacatctggctctacttcgcgtcggtgtcgatgccccgacaggagcaggccgacgccgtg
ctcacagccctcgccgaggccgggagaccactgtcgacagccgcgatcgagacgatcgtc
gacgtccggcgcactcgcctcgagcttctcctcaaggtcctcgacgtcgacggcgccgtg
acccgagtccagggtggctggaccggcaccgggcagccgtggacctacgacgccgagcgc
tatgcccgggtcgcccagagccgctccgatgagcagcagctcatgctcgactacgaactc
acgaccgagtgtcggatggccttcctccagcggaccctcgacgatgagacggccgtcccc
tgcggcaagtgcgacacgtgcgccgggccttggtatgccaccgacattcccgacaacgtc
atcggtgcggcccgtgaacgcctggctcgcgtcggcgtcgacctggaccctcgggcccag
tggcccacgggtatggaccggctcggcgtgccggtcaagggcaagatctcgttggacgag
gcattgtccggtggccgcgccctggcccggctgagcgacctcggctgggggaaccgtctg
cgacaggtgctgcgcgaggacgcccccgccacaccggagttgctccgcgcctgcgtcggc
gtgctggccgaatggggctggtcgcagcggcccgctggcatcgtcgcgatgccgtcacgc
agccatccgcagctcgtgcagtcgcttgccgccggcctggccgagatcgggcgcctgccc
ctgctcggcaccctcgacctccaacacggtggtcccacgggtgagcccggcggcaacagc
gccttccgtctcgccggggtgtgggagcgcctcgtcgtcggacccgaattggcgcagacg
ctggccggagtgcgtggcccggtgctcctcgtcgacgacctcgtcagctcacgctggacg
ctcaccgtcgcaggtcgcgggctccggcgcgcgggtgctgacggcgtcctgccattcacg
ctggccgttgacggctga
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