KEGG   Knoellia sp. S7-12: V6K52_07825
Entry
V6K52_07825       CDS       T10549                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
kno  Knoellia sp. S7-12
Pathway
kno00010  Glycolysis / Gluconeogenesis
kno00020  Citrate cycle (TCA cycle)
kno00260  Glycine, serine and threonine metabolism
kno00280  Valine, leucine and isoleucine degradation
kno00310  Lysine degradation
kno00380  Tryptophan metabolism
kno00620  Pyruvate metabolism
kno00630  Glyoxylate and dicarboxylate metabolism
kno00640  Propanoate metabolism
kno00670  One carbon pool by folate
kno00785  Lipoic acid metabolism
kno01100  Metabolic pathways
kno01110  Biosynthesis of secondary metabolites
kno01120  Microbial metabolism in diverse environments
kno01200  Carbon metabolism
kno01210  2-Oxocarboxylic acid metabolism
kno01240  Biosynthesis of cofactors
Module
kno_M00009  Citrate cycle (TCA cycle, Krebs cycle)
kno_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
kno_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
kno_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:kno00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    V6K52_07825 (lpdA)
   00020 Citrate cycle (TCA cycle)
    V6K52_07825 (lpdA)
   00620 Pyruvate metabolism
    V6K52_07825 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    V6K52_07825 (lpdA)
   00640 Propanoate metabolism
    V6K52_07825 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    V6K52_07825 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    V6K52_07825 (lpdA)
   00310 Lysine degradation
    V6K52_07825 (lpdA)
   00380 Tryptophan metabolism
    V6K52_07825 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    V6K52_07825 (lpdA)
   00670 One carbon pool by folate
    V6K52_07825 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:kno04147]
    V6K52_07825 (lpdA)
Enzymes [BR:kno01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     V6K52_07825 (lpdA)
Exosome [BR:kno04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   V6K52_07825 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like FAD_oxidored FAD_binding_3 GIDA FAD_binding_2 Thi4 NAD_binding_8 Amino_oxidase 2-Hacid_dh_C 3HCDH_N
Other DBs
NCBI-ProteinID: XAU40947
LinkDB
Position
1623476..1624873
AA seq 465 aa
MADFDVVVLGAGPGGYVAAIRASQLGLRAAVVESKYWGGVCLNVGCIPSKALIKNAELAH
TLQHDKAKFGIEGDATMSYGPTHKRSRQVSSGIVKGVHFLMKKNKIEEIDGWGTLTSSTS
MDVALNSGEKRTVTFDKLIIAAGAVTRMLPGVQVSQNVVTYEEQILDENLPGSMVIAGSG
AIGVEFAYVMKNFGVDVTIVEFLERMVPTEDADVSKELLKHYKKLGVKVLLSTKVEGVED
TGSGVKVTVSPAAGGDSQVLEADRFLSAIGFAPRTEGYGLEAAGVKLTDRGAIEIDDFCR
TNVDNVYAIGDCTAKVMLAHVAEAQGIVAAETIAGAETMPIEYDFIPRATYCHPQIGSFG
YSEAQAKEKGYDVKTATFPFSANGKAMGLGDAVGFVKIVADAKHNEILGAHMIGPDVTEL
LPVLNLAQKWDLTADEVARNVFAHPTLSEAVKESVHGIAGHMINL
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggctgattttgatgttgtcgtcctcggtgccggtcccggcggatacgtcgcggcgatc
cgcgcctcgcagctgggcctcagggccgctgtcgtggagtccaagtactggggtggcgtc
tgcctcaacgtcgggtgcatcccgtccaaggcgctgatcaagaacgccgagctggcgcac
accctccagcacgacaaggcaaagttcggcatcgagggagacgcgacgatgtcctacggc
ccgacgcacaagcgttcgcgtcaggtgtcctccggcatcgtcaagggtgtccacttcctc
atgaagaagaacaagatcgaggagatcgacggctggggcacgctcaccagctcgacctcg
atggatgtcgcgctcaactcgggggagaagcgcaccgtcaccttcgacaagctgatcatc
gctgctggcgccgtgactcgcatgctgcccggtgtgcaggtgtcgcagaacgtcgtcacc
tatgaggagcagatcctcgacgagaacctgcccgggtcgatggtcatcgccggctcgggt
gccatcggtgtcgagttcgcctacgtcatgaagaacttcggcgtcgacgtcacgatcgtc
gagttcctggaacgcatggtgccgaccgaggacgcggacgtgtccaaggagctgctcaag
cactacaagaagctcggggtcaaggtcctgctgtcaaccaaggtcgagggggtcgaggac
acgggctccggcgtcaaggtcacggtgtcgcccgccgctggcggagactcccaggtcctg
gaggcagacaggttcctctcggcgatcggcttcgctccgcgcaccgagggctacgggctc
gaggcagccggcgtcaagctcaccgaccgtggcgccatcgagatcgacgacttctgccgg
accaacgtcgacaacgtctatgccattggcgactgcaccgccaaggtgatgctcgcgcac
gtggccgaagcccagggcatcgtcgccgccgagacgatcgcgggcgctgagaccatgccg
atcgagtacgacttcatcccgcgagcgacctactgccacccgcagatcggctcgttcggc
tactccgaggcgcaggccaaggaaaagggctacgacgtcaagacggcgacgttcccgttc
agcgccaacggcaaggcgatgggtctcggcgacgctgtcggcttcgtcaagatcgtggct
gacgccaagcacaacgagatcctcggcgcccacatgatcggccccgacgtcaccgagctg
ctcccggtgctcaacctcgcgcagaagtgggacctcaccgctgacgaggtcgcccgcaac
gtcttcgcgcacccgaccctgtccgaggccgtcaaggagtcggtccacggcatcgccggc
cacatgatcaacctctag

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