Knoellia sp. S7-12: V6K52_08000
Help
Entry
V6K52_08000 CDS
T10549
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kno Knoellia sp. S7-12
Pathway
kno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6K52_08000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kno03019
]
V6K52_08000
03016 Transfer RNA biogenesis [BR:
kno03016
]
V6K52_08000
Enzymes [BR:
kno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
V6K52_08000
Messenger RNA biogenesis [BR:
kno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
V6K52_08000
Transfer RNA biogenesis [BR:
kno03016
]
Prokaryotic type
tRNA degradation factors
V6K52_08000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
XAU40980
LinkDB
All DBs
Position
1659129..1661570
Genome browser
AA seq
813 aa
AA seq
DB search
MEGPEITFAEATIDNGSHGTRTVRFETGRLAKQAGGAVAAYLDEDTMLLSTTTAGKHPRE
GFDFFPLTVDVEERMYAAGKIPGSFFRREGRPSTEAILTCRLIDRPLRPTFKKGLRNEVQ
VVISVLALNPDVQYDVLAINAASASTQISGLPFSGPIGAVRVSLIDDQWVAFPQFSDIER
STFDMVVAGRVAGDDVAIMMVEAEATEQTWNLVKNEGKTAPTEDVVAQGLEAAKGFIKVL
CEAQAELATKAAKPVQEFPVFLDYEDDVYAAVDAAASSDAAAALQIAGKSEREDRLDEIK
SALHLKLVGDFNPESSEGNAGDFAGREKEVSAAYRAVQKKLIRERIITDKVRIDGRGLAD
IRALSAEVEVLPRVHGSAIFERGETQIMGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFP
PYSTGETGRVGSPKRREIGHGALAERALMPVLPTREEFPYAIRQVSEALSSNGSTSMGSV
CASTLSMLNAGVPLRAPVAGIAMGLVTAEVDGKTEYAALTDILGAEDAFGDMDFKVAGTR
EFVTAIQLDTKLDGIPADVLGGALTQAREARLHILDVMNEAIDVPDEMSPFAPRVISVQV
PVDKIGEVIGPKGKMINQIQDDTGAQISIEDDGTIYIGATDGPSAEAARAAINAIANPQM
PELGERFLGTVVKTTTFGAFISLLPGKDGLLHISEVRKLVGGKRIDAVEDVLAVGQKVQV
ELKEIDPRGKLSLGAVLADDDSAASDANDAPADDAPDDDAPTKDVATEGDDASEATDSAE
SDTEGGERRQRSRRRGGRGRGQRSDAGDAFGDA
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcctgagatcacattcgccgaagccaccatcgacaacggctcacacggcacc
cgcactgtccggttcgagaccggacgcctggccaagcaggccggtggcgcagtcgccgcc
tatctggatgaggacacgatgctcctctccaccaccaccgctgggaagcacccgcgcgaa
ggctttgacttcttcccgctgaccgtcgacgtcgaagagcgcatgtatgccgcgggcaag
atccccggttcgttcttccgtcgggagggccgtccctccaccgaggccatcctcacctgc
cgtctcatcgaccgccccctgcgcccgaccttcaagaagggtctgcgcaacgaggtccag
gtcgtcatctcggtgctcgcgctcaacccggacgtccagtacgacgtcctcgcgatcaac
gcggcgtccgcctccacccagatctccggtctgccgttctcgggcccgatcggtgcggtg
cgcgtctcgctcatcgacgaccagtgggtcgccttcccgcagttctccgacatcgagcgc
tcgaccttcgacatggtcgtggctggtcgcgttgccggtgatgacgtggcaatcatgatg
gtcgaggccgaggccaccgagcagacctggaacctcgtcaagaacgagggcaagaccgct
cccaccgaggacgtcgtcgcgcagggcctcgaggccgccaagggcttcatcaaggtcctc
tgcgaggcgcaggccgagctggccaccaaggccgcgaagcccgtccaggaattccccgtc
ttcctcgactacgaagacgacgtgtatgccgcagtcgacgctgccgcttcctccgacgct
gccgctgcactccagatcgccggcaagtccgagcgtgaggaccgcctcgacgagatcaag
tcggcgctgcacctgaagctcgtgggtgacttcaaccccgagtcgtccgagggcaacgcc
ggtgacttcgccggacgcgagaaggaggtctcggcggcctatcgcgccgtgcagaagaag
ctcatccgtgagcggatcatcaccgacaaggtccgcatcgacggccgtggcctcgccgac
atccgcgcgctcagcgccgaggtcgaggtcctgccgcgtgtgcacggctccgcgatcttc
gagcgtggcgagacccagatcatgggtgtcacgacgctcaacatgctccgcatggagcag
cagctcgacaccctgtcgccggtgacgcgcaagcgctacatgcacaactacaacttcccg
ccctactccaccggtgagaccggtcgggtcgggtcgccgaagcgtcgcgagatcggccac
ggagcgctcgcagagcgtgcgctcatgccggtcctgcccacccgcgaggagttcccctac
gcgatccgtcaggtgtccgaggcgctcagctccaacggctcgacgtccatgggctcggtc
tgcgcctccaccctgtccatgctcaacgccggtgtgccgttgcgcgctccggtcgcgggc
atcgcgatgggtctggtcaccgccgaggttgacggcaagacggagtatgccgccctcacc
gacatcctcggcgccgaggacgcgttcggcgacatggacttcaaggtcgccggcacgcgc
gagttcgtcacggccatccagctcgacaccaagctcgacggcatccccgccgacgtgctc
ggtggtgcgctgacccaggcccgtgaggcccgtctgcacatcctcgacgtcatgaacgag
gccatcgacgtgcccgacgagatgagccccttcgctcctcgcgtcatctcggtgcaggtc
cccgttgacaagatcggtgaggtcatcggcccgaagggcaagatgatcaaccagatccag
gacgacaccggcgcccagatctcgatcgaggacgacggcaccatctacatcggtgccacc
gacggtccgtcggccgaggcggctcgcgcggcgatcaacgccatcgcgaacccgcagatg
cccgagctcggtgagcgcttcctcgggacggtcgtcaagacgaccaccttcggtgcgttc
atctccctgctgcccggcaaggacggtctgctccacatctccgaggtgcgcaagctcgtc
ggcggcaagcggatcgacgcagtcgaggacgtcctcgccgtgggccagaaggtgcaggtc
gagctcaaggagatcgacccgcgcggcaagctctcgctcggtgcggtcctcgccgacgac
gactctgcggcttctgacgcgaacgacgctccggcggacgacgcccccgatgacgatgct
cccaccaaggacgtcgccaccgagggtgacgacgcttccgaggcgaccgactcggctgag
tccgacaccgagggtggcgagcgccgtcagcgcagccgtcgtcgtggcggtcgcgggcgc
ggtcagcgctcggacgcgggcgacgctttcggcgacgcgtga
DBGET
integrated database retrieval system
