Knoellia sp. S7-12: V6K52_08220
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Entry
V6K52_08220 CDS
T10549
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
kno Knoellia sp. S7-12
Pathway
kno00300
Lysine biosynthesis
kno00470
D-Amino acid metabolism
kno01100
Metabolic pathways
kno01110
Biosynthesis of secondary metabolites
kno01120
Microbial metabolism in diverse environments
kno01230
Biosynthesis of amino acids
Module
kno_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
kno00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V6K52_08220 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V6K52_08220 (dapF)
Enzymes [BR:
kno01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
V6K52_08220 (dapF)
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Motif
Pfam:
DAP_epimerase
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
XAU41021
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Position
1707132..1708046
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AA seq
304 aa
AA seq
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MTAEPRSTKVLRFTKGHGTENDFVLLPDVDDRLDLDADLVRRLADRQAGIGGDGVIRVVP
TASADDQAVRALADRAPWFMDYRNADGSVAEMCGNGTRVFAAYLRREGLETADEFEIATR
GGVKGIRFEGDGENAVIATNMGLWRFLDPARAEADGFDSLVLLRDRPLAEDPWSALSVDM
GNPHTVVALPGPVDLAGLDLFHAPEVRPVPPHGTNVEFVRVVGTGHIAMRVHERGVGETR
SCGTGVCAAALATSFWAGDAEPTQDWTVDVPGGRLRVRGLPGHEVELAGPAALIADGTVD
LSAL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgagccgcgctccaccaaggtgctgcgcttcaccaaaggacacgggaccgag
aacgacttcgtgctgctgcccgatgtcgatgaccgcctcgacctcgacgccgacctggtc
cggcgcctcgctgaccggcaggccgggatcggtggtgacggtgtcatccgcgttgtcccc
actgcatcggccgacgaccaggccgtgcgtgccctggccgatcgtgctccgtggttcatg
gactaccgcaacgctgacggttcggtcgcggagatgtgcggcaacggcacgagagtcttt
gcggcatacctgcgtcgtgaaggactcgagacggcagacgagttcgagatcgcgacacgt
ggtggcgtcaagggcatccgcttcgagggcgacggcgagaacgcagtgatcgccaccaac
atggggctgtggcgcttcctcgaccccgccagggctgaggcagacggattcgactccctg
gtgttgctccgtgatcgaccgctggcagaggacccctggtcggccctgtcggtcgacatg
ggcaacccccacacggtcgtcgcgctgccggggcccgttgatctagcaggcctcgacctg
ttccacgcgcccgaggtccggccggtgccgccccacggcaccaacgtcgagttcgtccgc
gttgtcggcaccggccacatcgcgatgcgggtccacgagcgcggggtcggcgagacccgc
tcctgtggcaccggcgtctgcgcagcggcgctggccacgagcttctgggcaggtgacgcc
gagccgacccaggactggacggtcgacgtccctggcggtcgactgcgcgtgcgcgggctg
cccgggcacgaggtcgagctcgccgggccagcagccctcatcgccgacggcactgtggac
ctctccgctctctga
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