Knoellia sp. S7-12: V6K52_11805
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Entry
V6K52_11805 CDS
T10549
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
kno Knoellia sp. S7-12
Pathway
kno03030
DNA replication
kno03430
Mismatch repair
kno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6K52_11805
03430 Mismatch repair
V6K52_11805
03440 Homologous recombination
V6K52_11805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kno03032
]
V6K52_11805
03400 DNA repair and recombination proteins [BR:
kno03400
]
V6K52_11805
Enzymes [BR:
kno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6K52_11805
DNA replication proteins [BR:
kno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V6K52_11805
DNA repair and recombination proteins [BR:
kno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V6K52_11805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
UVR
DUF7508
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XAU37923
LinkDB
All DBs
Position
2464644..2466359
Genome browser
AA seq
571 aa
AA seq
DB search
MQMVQGTLDDLGTPLSDVTFVVVDLETTGGSASECGITEIGAVKVRGGEVLGEFQTFVNP
GQPIPAFISVLTGITDAMVRNAPRVEPALISFLEFAAGSVLVAHNAGFDVSFLKAACARA
ERDWPRFPVVDTVHLARQLVTRDEAPNHRLGSLAILFGAATTPDHRALHDARATVDVLHG
LIARVGSLGVHSLEELKAYSSKVPSATRRKRHLADGLPEAPGVYLFKDGQGRVLYVGTSV
SIRTRVRSYFTASEKRRRMVEMVRIAESVTPIVCATPLEAEVRELRLIAEHKPRYNQKSR
NPERSWWVKLTVEPFPRLSIVRQVADDDTRYIGPFASRGSADDAVAAVHEVLPLRQCLER
LSATKFRSACALADMGRCGAPCTGEQSIEDYADVVAEAVALLAGDATSAVSTWRERMDHL
ADQERFEDAGVVRDRMLSLVRGASRAQRLDPLSRTAELLAARRSETGGWEVMCIRHGRLA
GSTMSPRGADPMPYVEALRASAEVVRVPLPPATSATPEESERILRWLDAPGVRVVDIDGA
WTCPVGGATGVRNELEPVEMSRRLTPGFRSA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggtccagggcactctcgatgacctgggcacccctctgtcggacgtgacgttc
gtcgtcgtcgacctcgagaccaccggtggcagcgcgagcgagtgcggcatcaccgagatc
ggcgcggtcaaggtgcgcggcggtgaggtgctcggcgagttccagaccttcgtcaacccg
ggccaaccgatccccgccttcatctccgtcctcaccggcatcaccgatgcgatggtccgc
aatgcacctcgcgtcgagccggccctcatctccttcctcgagttcgccgccggctcggtg
ctcgtggcccacaacgcgggtttcgacgtctcgttcctcaaggcggcctgcgcccgcgcc
gagcgcgactggccccgcttcccggtcgtcgacaccgtccatctcgcccgccagctcgtg
acgcgtgacgaggccccgaatcaccgattgggttctctcgcaatacttttcggcgcagcg
accacgcctgatcaccgggccctccacgacgcgcgagctaccgtcgacgtgctccacggg
ctcatcgcccgcgtcggttctcttggagtgcactcgctcgaggagctcaaggcctactcg
tccaaggtcccgtcggcgacgaggcgcaagcgccacctcgccgacgggctgcccgaggcg
ccgggtgtctacctgttcaaggacggccagggccgggtcctctatgtcggcacgtcggtg
tccatccgcacgcgcgtgcgcagctatttcacggcgtccgagaagcgccgccggatggtc
gagatggtccgcatcgccgagtccgtgacaccgatcgtgtgcgccacaccgctcgaggcc
gaggtgcgcgagctgcgcctcatcgccgagcacaagccccgctacaaccagaagtcccgc
aaccccgagcgctcgtggtgggtcaagctcacggtcgagccgttcccccggctctcgatc
gtgcgtcaggtcgccgacgacgacacccgctacatcggcccgttcgcctcccgcggctcg
gccgacgacgcggtcgctgccgtccacgaggtcctgcccctgcgtcagtgcctcgaacgg
ttgtcggccacgaagtttcgctccgcgtgcgccctcgccgacatgggacggtgcggcgcc
ccgtgcactggagagcagagcatcgaggactacgccgacgtggtcgccgaagccgttgcc
ctcctggccggagatgccacctcggccgtgtcgacgtggcgcgagcggatggaccatctc
gccgaccaggaacgcttcgaggacgctggcgtggtgcgcgaccggatgctcagtctggtc
cgcggcgcttcccgcgcccagcggctcgacccgttgtcgcggaccgctgagctgctcgcg
gcacggcggagcgagaccgggggttgggaggtcatgtgcattcgtcacgggcgccttgcc
ggcagcacgatgtcaccgcgtggagcagatccgatgccctacgtcgaggcgctgcgagcc
agcgccgaggtcgtgcgggttcccctgccgcccgccacctcggcgacacccgaggagagc
gagcggatcctgcgctggctcgatgccccaggggtgcgcgtcgtcgacatcgacggtgcc
tggacctgtcccgtcggaggtgccaccggggtccggaacgaactcgagcccgtcgagatg
tcccgtcgcctcacccccggtttccgctccgcctga
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