Knoellia sp. S7-12: V6K52_12145
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Entry
V6K52_12145 CDS
T10549
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kno Knoellia sp. S7-12
Pathway
kno03030
DNA replication
kno03430
Mismatch repair
kno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6K52_12145 (dnaE)
03430 Mismatch repair
V6K52_12145 (dnaE)
03440 Homologous recombination
V6K52_12145 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kno03032
]
V6K52_12145 (dnaE)
03400 DNA repair and recombination proteins [BR:
kno03400
]
V6K52_12145 (dnaE)
Enzymes [BR:
kno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6K52_12145 (dnaE)
DNA replication proteins [BR:
kno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V6K52_12145 (dnaE)
DNA repair and recombination proteins [BR:
kno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V6K52_12145 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
XAU37986
LinkDB
All DBs
Position
complement(2531578..2535192)
Genome browser
AA seq
1204 aa
AA seq
DB search
MSSPSSSPVPDRKDNFVHLHVHTEYSMLDGAARIGDLFTRASELGMPALAMTDHGYLYGA
HEFWRKAQGTGVKPIIGLEAYITPGTHRTDKTRVKWGDERTRQGDDVSGSGAYTHMTLLA
KDNDGLRNLFKMDSQASLDQVYAKWPRIDRELLDQHGKGLIATTGCPSSEIQTRLRLGQY
DLAKQAASDYRDLFGAENYFCEVMDHQNEIERRTIKDLLRLAKELDLPLLATNDSHYTYP
EDSTAHGALLCVQSGSTLMDPNRFKFDGDGYYLKSAAEMRHTWREFPEACDNTLLVADMC
EVSFTEGEGRYMPKFQCPPGESEESWFVKEVQAGLRERFPDGIPEYAQKQAEYETEVIVS
KGYPGYFLVVADFITWAKKNGIRVGPGRGSGAGSMCAYVMKITDLDPIPHGLIFERFLNP
ERMSMPDFDIDFDERRRAEVIRYVTEKYGSERVAQIVTYGTIKAKQAVKDSARVMGHPFN
VGDQLTKAMPADVMGKGVPLSGIYDPEHPRYAEGNEFRALVESEPHFKEVVETAKGLEGL
KRQWGVHAAGVIMSSEPLIDVIPIMKRLQDGQILTQFDYPTCETLGLVKMDFLGLRNLTI
LDDAIENVKANRGEDLDLDALSKDMTDKATYRLLASGDTLGVFQLDGGGMRTLLKLMQPD
NFEDISAALALYRPGPMGVNAHTNFALRKNGKQELTPLDPQLKGKLQQEMIDALLPLLGT
TYGLVIYQEQVMEIAQKLAGYTLGNADLLRRAMGKKKKEVLDAEYVPFSNGMKAKGFNEA
SIAALWGVLVPFSDYAFNKAHTAAYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKSAL
YLGECRRMGIKVLPPDVNDSVARFAAVGTDIRFGMAAIRNVGHNVVEAIIGARESKGAFT
SFRDFLSKCSAVVCNKRTVESLIKGGAFDGLGESRAGLLRIHEEYVDAFVSIKRQEAIGQ
DSLFGAFGDDGGDGAGGDATMMGLTSVPTVEWDKSTLLTFEREMLGLYVSDHPLFGVEHV
LQQHADTAIATLSSEEGKPEGSMVTVAGLITGLQIKRTKKGDLWAIATVEDLEGAIECLF
FPSSYLTVSTMLQQDVVAVVRGKLNRRDDSVSIYAQELTLPEITEGPRGPVVVTLDTVRA
TTGRMEELKGVLANHPGTTEVHLKLTKPGRATLIKLDDALRVNASESLFGDLKVLLGPRC
LTGG
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgccctcctcttccccagtcccggaccgcaaggacaatttcgtccacctgcac
gtccacaccgagtactccatgctcgacggggctgcccgcatcggagacctgttcacacgg
gccagcgagttgggtatgccggcgctcgccatgacggaccacggttacctctacggtgca
cacgagttctggcgcaaggcgcaggggaccggcgtcaagccgatcatcggtctcgaggcc
tacatcacgccgggcacccaccgcaccgacaagacccgcgtcaagtggggcgacgagcgc
acccgacaaggtgatgacgtctccggttcgggcgcctacacacacatgacgctgctggcc
aaggacaacgacggcctgcgcaacctgttcaagatggacagccaggcctcgctcgatcag
gtctatgccaagtggccgcgcatcgaccgcgagctgcttgaccagcacgggaaggggctc
atcgcgacgaccggttgcccctcgagcgagatccagacccggctgcgcctgggccagtac
gacctggccaaacaggcggcgagcgactaccgcgacctgttcggtgccgagaactacttc
tgtgaggtcatggaccaccagaacgagatcgagcggcggacgatcaaggacctgctgcgc
ctcgccaaggagctcgacctcccactgctcgcgaccaacgacagccactacacctacccc
gaggactccacggcgcacggtgccctgctctgcgtccagtccggctcgaccctcatggac
cccaaccggttcaagttcgacggtgacggttactacctcaagtccgcggccgagatgcgc
cacacctggcgtgagttccccgaggcgtgtgacaacaccctgctcgttgccgacatgtgc
gaggtctccttcaccgagggtgagggtcgctacatgccgaagttccagtgtccccctggc
gagagcgaggagtcctggttcgtcaaggaggtccaggcgggtctgcgcgagaggttcccg
gacggcataccggaatatgcgcagaagcaggccgagtacgaaaccgaggtgatcgtctcc
aagggctaccccggctacttcctcgtcgtcgccgacttcatcacctgggccaagaagaac
ggcatccgggtcggcccgggtcgtggctcgggcgccggatccatgtgcgcctacgtcatg
aagatcaccgacctcgacccgatccctcacggtctgatcttcgagcggttcctcaacccc
gaacgcatgtcgatgcccgacttcgacatcgacttcgacgagcgccgacgcgctgaggtc
atccgctacgtcaccgagaagtacggctcggagcgggttgcgcagatcgtcacctacggc
acgatcaaggccaagcaggcggtcaaggactcggcccgtgtcatgggccacccgttcaat
gtcggcgaccagctcaccaaggcgatgccggccgacgtgatgggcaagggcgtgccgctc
tcgggcatctacgaccctgagcacccgcgctacgccgagggcaacgagttccgagccctc
gtcgagagcgagccgcacttcaaggaggtcgtcgagaccgccaagggcctcgagggactg
aagcgacagtggggcgtgcacgctgccggcgtcatcatgtcgagcgaaccgctcatcgac
gtcatcccgatcatgaagcggttgcaggacggccagatcctcacccagttcgactacccc
acgtgcgagaccctcgggctcgtcaagatggacttcctcggcctgcgcaacctcacgatc
ctcgacgacgccatcgagaacgtgaaggccaaccggggcgaggacctcgacctcgacgcc
ctgtccaaggacatgaccgacaaggcgacctaccgcctgctcgcgagcggtgacacgctg
ggcgtcttccagctcgatggcggcggcatgcgcacgctgctcaagctgatgcagcccgac
aacttcgaggacatctcggcggctctcgctctctatcggcccgggccgatgggtgtcaac
gcgcacacgaacttcgcgctgcgcaagaacggcaagcaggagctcacgccgctcgaccct
cagctcaagggcaagctccagcaggagatgatcgacgctctgctgccgctcctcggcacg
acctacggcctggtgatctaccaggagcaggtcatggagatcgcgcagaagctcgccggc
tacaccctcggcaacgccgacctcctccgccgcgccatgggcaagaagaagaaggaggtg
ctcgacgccgagtacgtccccttctccaacgggatgaaggccaagggcttcaacgaagcc
tccatcgcggccctctggggcgtcctcgtccccttctcggactacgcgttcaacaaggcc
cacaccgcggcatacgggctcgtgtcgtattggacggcgtacctcaaggccaactacccg
gccgaatacatggccggtctgctcacgagcgtcggtgacgacaaggacaagtcggcgctc
tatctcggcgagtgccgtcgcatgggcatcaaggtgctcccgcccgacgtcaacgattcc
gtggcccggttcgcggctgtcggcaccgacattcgcttcgggatggcggcgatccgcaac
gtgggccacaacgtcgtcgaagcgatcatcggcgcacgcgagagcaagggcgccttcacc
tcgttccgcgacttcctgtccaaatgttccgcagtggtctgcaacaagcgaaccgtcgag
tcgctcatcaagggaggcgccttcgacgggctgggggagtcgcgcgccgggctccttcgc
atccatgaggaatacgtcgacgcgttcgtctcgatcaagcgccaggaggcgatcggtcag
gattcgctctttggtgccttcggtgacgacggtggcgacggcgccggtggggacgcgacg
atgatgggcctcacgtccgtccccacggtcgagtgggacaagtcgacgctgctgacgttc
gagcgcgagatgctcggcctctatgtctccgaccaccctctcttcggcgtcgagcacgtc
ctgcagcagcatgccgacaccgccatcgcgacgctgagctccgaggagggcaagcccgag
ggctcgatggtcaccgtggccggtctcatcacaggcctgcagatcaagcggaccaagaag
ggcgacctctgggcgatcgccaccgtcgaggacctcgagggagcgatcgagtgcctgttc
ttccccagctcctacctgaccgtgtcgacgatgctccagcaggacgtcgtcgccgtggtg
cgcggcaagctcaaccggcgtgacgactcggtgtcgatctatgcccaggaactgaccttg
cccgagatcaccgaaggccctcgtgggccggtggtcgtcacactcgacacggtccgagca
acgaccggtcggatggaggagctcaagggggtcctcgccaaccacccggggacgaccgaa
gtgcatctcaagctgaccaagcccggtagggcgaccctgatcaagctcgatgatgccctc
cgcgtcaacgcgagcgagtcgctcttcggcgacctcaaagtgctcttgggaccgaggtgt
ctcaccggtggctga
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integrated database retrieval system
