Knoellia sp. S7-12: V6K52_13540
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Entry
V6K52_13540 CDS
T10549
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
kno Knoellia sp. S7-12
Pathway
kno02024
Quorum sensing
kno03060
Protein export
kno03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
kno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
V6K52_13540 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
V6K52_13540 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6K52_13540 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
kno02044
]
V6K52_13540 (ffh)
Enzymes [BR:
kno01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
V6K52_13540 (ffh)
Secretion system [BR:
kno02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
V6K52_13540 (ffh)
Eukaryotic Sec-SRP protein
V6K52_13540 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
nSTAND3
AAA_22
Zeta_toxin
APS_kinase
AAA_30
ArsA_ATPase
NTPase_1
6PF2K
AAA_16
Thymidylate_kin
AAA_18
MobB
NPHP3_N
AAA_33
ParA
TsaE
Mg_chelatase
NACHT
AAA_24
AAA_31
ATP_bind_1
SLFN-g3_helicase
bPH_10
Motif
Other DBs
NCBI-ProteinID:
XAU38255
LinkDB
All DBs
Position
complement(2822963..2824579)
Genome browser
AA seq
538 aa
AA seq
DB search
MFTSLSDRLTATFKNLRTKGRLSESDVNKTVRDIRMALLDADVALPVVKEFTSAVRERAL
GAEVSQSLNPAQQIVKIVNEELVEILGGQTRTIRFAKTGPTVIMLAGLQGAGKTTLAGKL
ARWLKDQGHTPILVAADLQRPNAVTQLQVVGERAGVPVFAPEQGNVGGHDAVGGTGEGTR
SFGDPVTVSRDGIREAENKHHDVVIVDTAGRLAVDADLMKQAGDIRAAINPNEVLFVIDA
MIGQAAVETAEAFLEGVDFTGVVLSKLDGDARGGAALSVAKVTGRPIMFASTGEQVKDFE
VFHPDRMASRILDMGDVLTLIEQAEKAFDRGEAAEMERKFLAAEDFTFDDFLQQMSAIKK
MGSLKSMLKMMPGMGQMSAQLDNLDEREFDRVEAMVRSMTPFERNHPKQINGSRRARIAG
GSGVTTSEVNQLLERFGEAQKMMKQLARGGGIPGMPGMGGGGGGKKARQQQQQVRGKKSK
SGNPAKRAADAQADAQRAAAKPAGGAFGGGAGADAGGIDPANLDPSQLPKGFEKFLGK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
gtgttcacgagcctctccgaccgcctgacagcgaccttcaagaacctccgcaccaagggg
cgcctgtccgagtccgacgtcaacaagaccgtccgcgacatccggatggcgctgctcgat
gccgacgtcgccctgccggtggtcaaggagttcacctcagccgtccgtgagcgtgccctc
ggcgcagaggtctcgcagtcgctcaacccggcgcagcagatcgtcaagatcgtcaacgag
gagctcgtcgagatcctcggcggacagacccgcacgatccgcttcgccaagaccggcccc
accgtcatcatgctcgcgggcctccagggcgcaggcaagacgacgctcgccggcaagctc
gcccgctggctcaaggatcagggccacaccccgatcctcgtcgccgcggacctccaacga
cccaacgccgtgacccagctccaggtggtcggtgagcgcgccggtgtgccggtgttcgct
cccgagcagggcaacgtcggcggacacgacgccgtcggtggcacaggcgaaggcacccgt
agctttggtgacccggtcacggtgtctcgtgacggcatacgcgaagccgagaacaagcac
cacgacgtcgtcatcgtcgacaccgccggacgcctcgcggtcgacgccgacctgatgaag
caggccggggacatccgcgccgccatcaaccccaacgaagtcctcttcgtcatcgacgcg
atgatcggtcaagccgcggtcgagaccgccgaggccttcctcgagggcgtcgacttcacc
ggcgtcgtcctgtccaagctcgacggtgacgcccgcggtggtgccgcgctgtccgtcgcc
aaggtcacgggccggccgatcatgtttgcctcgacgggtgagcaggtcaaggacttcgag
gtcttccatcccgaccgcatggcctcgcgcatcctcgacatgggtgacgtcctcaccctc
atcgagcaggccgaaaaggcgttcgaccggggcgaggccgccgagatggagcgcaagttc
ctcgcggccgaggacttcaccttcgacgacttcctccagcagatgtcggcgatcaagaag
atgggctcgctcaagtcgatgctcaagatgatgccgggcatgggccagatgtcggcccag
ctcgacaacctcgacgagcgcgagttcgaccgcgtcgaggcgatggtccgctcgatgacg
ccattcgaacgcaaccaccccaagcagatcaacggctcgcgtcgcgcccgcatcgccggc
ggctcgggtgtgacgacttctgaggtcaaccagctgctcgagcgcttcggtgaggcgcag
aagatgatgaagcagctcgcccgcggtggcggcatccccggcatgcccgggatgggtggc
ggtggcggcggcaagaaggctcgtcagcagcagcaacaggtgcgtggcaagaagtccaag
tccggcaaccccgcgaagcgggcggccgacgcccaggcggatgcccagcgcgctgccgcc
aagcctgccggaggcgccttcggtggcggagcaggggcagatgccggtggcatcgatccc
gcgaacctcgacccgtcgcagctgcccaagggcttcgagaagttcctcggcaagtga
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