Knoellia sp. S7-12: V6K52_15420
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Entry
V6K52_15420 CDS
T10549
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kno Knoellia sp. S7-12
Pathway
kno03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V6K52_15420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kno03400
]
V6K52_15420
Enzymes [BR:
kno01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
V6K52_15420
DNA repair and recombination proteins [BR:
kno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V6K52_15420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XAU38623
LinkDB
All DBs
Position
3220099..3220956
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AA seq
285 aa
AA seq
DB search
MTGTDGVARVGPDLHPITGEAFLSPVPPGSGWPGDPATPATPVAASAHDVPTLAASALTL
TEVDARVTVCRACPRLVDWRETVAREDRRASFADQPYWGRPGPSFGDPDATALIVGLAPA
ANGTNRTGRMFTGDASGDFLYAALHRTGFANQPTSVGAGDGLELTGIRIVAAVRCAPPEN
KPTPTERATCATWLGRDLELLGDRLRVIMTLGEIGWKGVLAATTTLGWAVPKPRPKFGHG
TESVLHTPGGTPVRLVGCYHVSPHNTYTKRLTPQMLDATLISLRR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgacgggcaccgacggggtggcacgcgtcggccccgacctgcacccgatcaccggtgag
gcattcctctcccccgtcccaccgggctccggctggcccggcgaccccgcaaccccagca
acccccgtcgcggccagcgcccacgacgtccccacccttgcggccagcgccctgaccctc
accgaggtcgacgcccgagtcaccgtctgccgagcctgcccgcgactcgtcgactggcgc
gaaaccgttgcgagagaggaccgtcgggcatcgttcgccgaccagccctactggggccga
ccggggccatcgttcggcgaccccgacgccacagccctcatcgtcggactggcacccgcc
gccaacggcaccaaccggaccggtcggatgttcaccggtgacgcctccggcgacttcctg
tatgccgccctccaccgcacaggattcgccaaccaacccacctcggtcggtgcgggcgac
ggcctcgagctgaccggcatacgcatcgttgccgccgtgcgctgcgccccgcccgagaac
aagcccacgccaacggaaagggccacgtgcgcgacctggctgggccgcgacctcgagctc
ctcggcgatcgcctgcgcgtcatcatgaccctcggcgagatcggctggaagggcgtcctc
gccgcaacgacaacactcggctgggccgtccccaagccacgccccaagttcggccacggc
accgagtccgtcctgcacacccccggcggcacacccgtccggctcgtcggctgctatcac
gtgagcccgcacaacacctacaccaagcgcctcaccccgcagatgctcgacgccaccctg
atcagcctgcgtcgctga
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