Knoellia sp. S7-12: V6K52_16440
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Entry
V6K52_16440 CDS
T10549
Name
(GenBank) DNA repair helicase XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
kno Knoellia sp. S7-12
Pathway
kno03420
Nucleotide excision repair
Brite
Enzymes [BR:
kno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V6K52_16440
Transcription machinery [BR:
kno03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
V6K52_16440
DNA repair and recombination proteins [BR:
kno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
V6K52_16440
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XAU38815
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Position
3438299..3439936
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AA seq
545 aa
AA seq
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MTDGALIVQSDKTLLLEVDHPKSAEARRAIAPFAELERAPEHIHTYRITPLGLWNARAAG
HDAEQVVDALVTHSRYPVPHALLVDVADTMARYGRLTLTKDGDRLVLRTTDRAVLTEVLR
HKRIKPLIGERIDEDTVVVHPSERGHLKQELLKVGWPAEDEAGYVDGEAHKITLDQSDGW
TMRPYQEQAVDGFWDGGSGVIVLPCGAGKTLVGAGAMAKASATTLILVTNTVSARQWKDE
LIRRTSLTEEEIGEYSGARKEIRPVTIATYQVLTTRRKGVYTHLDLLDARDWGLVVYDEV
HLLPAPIFRMTADLQARRRLGLTATLVREDGLESDVFSLIGPKRFDAPWKDIEAQGYIAP
ADCVEVRVTLPDGQRMAYAVAEAEDRYRLASCSDAKLPVVEKLVEKHRGEPTLVIGQYLD
QLDELSTRLGAEVITGATTVTERQRLYSAFRDGEISLLVVSKVANFSIDLPEASVAIQVS
GTFGSRQEEAQRLGRVLRPKGDGRTAHFYTVVARDTVDADFAAHRQRFLAEQGYAYRIVD
ADDLT
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacggcgcactgattgtccagagcgacaagaccctcctgctcgaggtcgaccac
cccaagtcggcggaggcacggcgcgccatcgcacctttcgctgagctggagcgagcgccg
gagcacatccacacctatcgcatcactcctctggggctgtggaacgcacgcgcggccggc
cacgatgcggagcaggtcgtcgatgcactggtcacgcacagtcgctaccccgtgccgcat
gccctgctcgtcgatgtcgccgacacgatggcgcgctacggccgcctgacgctcaccaag
gacggcgatcgtctcgtcctgcgcaccaccgaccgcgccgtgctcaccgaagtgttgcgg
cacaagcgaatcaagcccctcatcggcgaacgcatcgacgaggacacggtcgtcgtgcac
ccgagcgagcgcggccacctcaagcaggagctgctcaaggtggggtggccggccgaggac
gaggcaggctacgtcgacggcgaagcgcacaagatcaccctcgaccagagcgacggctgg
accatgcgcccctaccaggagcaggcggttgacggcttctgggacggcggctcgggcgtc
atcgtgctcccctgtggtgcaggcaagacccttgtgggcgcgggcgcgatggccaaggcg
tcggcgacgaccctcatcctcgtcaccaacacggtctcggcgcgtcagtggaaggacgag
ctgatccgccgcacgagcctcaccgaggaagagatcggcgagtactccggtgcccgcaag
gagatccgccccgtcacgatcgcgacctaccaggtgctcaccactcgtcgcaagggcgtc
tacacgcacctcgacctgcttgacgcccgcgactgggggctcgtcgtctatgacgaggtg
cacctgctcccggcgccgatcttccggatgactgcggacctccaggcccgacgccgattg
gggctcaccgcaacgctggtgcgcgaggacgggctcgagtccgacgtcttctccctcatt
ggcccgaagcgtttcgacgccccgtggaaggacatcgaggcgcagggctacatcgcgccg
gccgactgcgtcgaagtgcgagtcacgctgcctgacggacagcgcatggcgtatgccgtc
gctgaagccgaggaccgctaccgcctcgcctcctgctcggatgcgaagctccctgtcgtc
gagaagctcgtcgagaagcaccgaggcgaaccgacactcgtcatcggccagtacctcgac
cagctcgacgagctctccacccgattgggtgccgaggtcatcacgggggcgaccacggtg
accgagcgacagcggctctacagcgcgttccgcgacggcgagatcagcctgctcgtcgtc
tcgaaggtcgccaacttctcgatcgacctgcccgaggccagcgtcgccatccaggtgtca
gggaccttcgggtcgcgccaggaagaggcccagcgacttggtcgcgtcctgcggcccaag
ggcgacggtcggacggcgcacttctacaccgtcgtcgcacgggacaccgtcgacgccgac
ttcgccgcccaccgccagcggttcctcgccgagcagggctacgcctaccgcatcgtcgac
gccgacgacctcacctga
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