Knoellia sp. S7-12: V6K52_16530
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Entry
V6K52_16530 CDS
T10549
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
kno Knoellia sp. S7-12
Pathway
kno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6K52_16530 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kno03019
]
V6K52_16530 (groL)
03110 Chaperones and folding catalysts [BR:
kno03110
]
V6K52_16530 (groL)
03029 Mitochondrial biogenesis [BR:
kno03029
]
V6K52_16530 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kno04147
]
V6K52_16530 (groL)
Enzymes [BR:
kno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
V6K52_16530 (groL)
Messenger RNA biogenesis [BR:
kno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
V6K52_16530 (groL)
Chaperones and folding catalysts [BR:
kno03110
]
Heat shock proteins
HSP60 / Chaperonin
V6K52_16530 (groL)
Mitochondrial biogenesis [BR:
kno03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
V6K52_16530 (groL)
Exosome [BR:
kno04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
V6K52_16530 (groL)
Exosomal proteins of other body fluids (saliva and urine)
V6K52_16530 (groL)
Exosomal proteins of breast cancer cells
V6K52_16530 (groL)
Exosomal proteins of colorectal cancer cells
V6K52_16530 (groL)
Exosomal proteins of bladder cancer cells
V6K52_16530 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5021
CbiA
DUF4844
Motif
Other DBs
NCBI-ProteinID:
XAU38833
LinkDB
All DBs
Position
complement(3458029..3459666)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNILADAVRVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSAELLNNAKDVETKEQIAATASISAADPQIGEMIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISHYFVTDPERMETVLDDPYVLVVNSKIGQIKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLADIAILTGGQVIS
EEVGLKLDTAELDLLGTARKVVVTKDETTIVEGSGDADQIQGRVNQIRAEIEKSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
GKVAFEKLELEGDEATGANIVRVAISAPLKQIAINAGLEGGVVSEKVANLESGWGLNAAT
GEYVDLIAAGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKASAAMGGGGDEMGGM
GGMGF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcttttgatgaagaggcacgccgcggactcgagcgaggaatgaac
atcctcgccgacgccgtcagggtcaccctgggccccaagggccgcaacgtcgtgctggag
aagaagtggggagcccccacgatcaccaacgacggtgtgtccatcgccaaggagatcgag
ctcgacgacccctacgagaagatcggcgccgagctggtcaaggaggtcgccaagaagacc
gacgacgtcgccggtgacggcacgacgacggcgaccgttctcgcccaggccctcgtcaag
gaaggcctgcgcaacgttgctgctggcgccaacccgatggcgctcaagcgcggcatcgag
aaggctgtcgaggctgtctccgccgagctgctcaacaacgccaaggacgtcgagaccaag
gagcagattgctgctaccgcctcgatctccgcagctgacccccagatcggcgagatgatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagagcaacacc
ttcggcctcgagctcgagctcaccgagggcatgcgctttgacaagggctacatcagccac
tacttcgtgaccgaccccgagcgcatggagaccgtcctcgacgacccctacgtgctcgtc
gtcaactcgaagatcggccagatcaaggacctgctgcccctcctcgagaaggtcatgcag
tccggcaagccgctcctcatcattgccgaggacgtcgagggcgaagccctgtcgacgctc
gtcgtcaacaagatccgcggcaccttcaagtcggttgccgtcaaggctcctggcttcggt
gaccgtcgcaaggccatgctggccgacatcgccatcctcaccggtggtcaggtcatctcc
gaggaggtcgggctcaaactcgacaccgcagagctggacctgctcggcaccgcacgcaag
gtcgtcgtcaccaaggacgagacgaccatcgtcgagggctccggtgacgccgaccagatc
cagggtcgcgtcaaccagatccgcgccgagatcgagaagtcggactccgactacgaccgc
gagaagctccaggagcgcctcgccaagctcgctggtggcgtcgctgtcatcaaggcgggc
gcggccactgaggtcgagctcaaggagcgcaagcaccgcatcgaggatgccgtgcgcaac
gccaaggctgccgtcgaagagggcattgtcgccggtggcggcgtcgctctcctccaggcg
ggcaaggtcgcgttcgagaagctcgagctcgagggtgacgaggcgacgggcgccaacatc
gtgcgtgtcgcgatctcggccccgctcaagcagatcgccatcaacgctggcctcgaaggc
ggcgtcgtctccgagaaggtcgccaacctcgagtccggttggggcctcaacgctgcgacg
ggtgagtacgtcgacctcatcgctgcgggcatcatcgacccggccaaggtgacgcgttcg
gcactgcagaacgctgcgtcgatcgccgcgctgttcctcaccaccgaagcagtcatcgct
gacaagcccgaaaaggcttctgcagcgatgggcggcggcggcgacgagatgggcggcatg
ggcggtatgggcttctga
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