Kolteria novifilia: Pan216_09100
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Entry
Pan216_09100 CDS
T11180
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
knv Kolteria novifilia
Pathway
knv03410
Base excision repair
knv03430
Mismatch repair
knv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
knv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pan216_09100 (recJ)
03430 Mismatch repair
Pan216_09100 (recJ)
03440 Homologous recombination
Pan216_09100 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
knv03400
]
Pan216_09100 (recJ)
DNA repair and recombination proteins [BR:
knv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Pan216_09100 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Pan216_09100 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Pan216_09100 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QDU60073
UniProt:
A0A518AZD6
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All DBs
Position
complement(1179978..1181726)
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AA seq
582 aa
AA seq
DB search
MSRRWILSPDRREAGFSLAESLRVHPVVGHLLANRGVEKPEDARRFLQRQLSSLHDPESL
PGAVDAAERLHEAVAANKNILIYGDYDVDGMCGTAVLLRCLKLAGVQPRFYVPDRLEEGY
GVNLDSLQRLREEGIDLVITVDCGITSVEEARRARELGLEFIVTDHHEFQESLPEADAVV
HPRLPGSEYPFGELCGAGVAFKLAWQFARRYTGQQRVGEIFQRFLLEALGLVALATIADV
VPLRDENRVIVHHGLQSIQRSPTLGIQRLMRICGLTEKSQLGVGDVAFTLAPRLNACGRL
GQARLGIELLTTGDPSRANELAAYLETANKDRQTLERRVFTEAKKLHEEMVGEEGDLAAI
VLASEEWHPGVVGIVASRMVERFHRPCILIALSEELGSGSARSIPGFDIQEALTHCQEHL
LTCGGHAMAAGMRITPEKIDAFRERFTEVADRRILPEQRVPVLRIDVEVPLHTLTNDLIR
SLAVMEPFGLSNPSPVMLATDLQLVGEPKCVGGGGRHLSFRVRQNGKAMKAIAFGMADRA
EELASDNGKCCVVFSPIVNEFRGFKEVELQVKDFRAGSRVTD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgttggattctctctcccgatcgtcgcgaagcgggcttctcgctcgccgag
tcgctgcgcgtccaccccgtcgtggggcacttgctcgccaatcgcggcgtcgagaaaccg
gaggacgcccgtcgcttcctgcagcgtcagctctcctcgctgcacgatcccgaaagcctg
cccggcgccgtcgacgccgccgagcgtctgcatgaggccgtcgccgccaacaagaacatc
ctcatctacggcgactatgacgtcgacggcatgtgcggaacggccgtgctgttgcgttgc
ctcaaactggcgggcgtgcagccccgcttctacgtgcccgaccggctcgaggagggctac
ggcgtcaatctcgattcgcttcagcggctgcgcgaggaggggatcgacctggtcatcacc
gtcgactgcggcatcaccagcgtcgaggaagcgcggcgtgcccgcgaactggggctcgag
ttcatcgtcaccgaccaccacgaattccaggagagcctgcccgaggccgatgccgtcgtg
catccgcgactgcccggatcagagtatcccttcggcgagctctgcggcgcgggggtcgcg
ttcaagctcgcgtggcaattcgcccgtcgctacaccggccaacagcgcgtgggagagatc
tttcaacggttcctgctcgaagccctggggctggtcgcgcttgccaccatcgccgacgtc
gtgccgctgcgcgacgagaaccgcgtcatcgtccatcacggcttgcagtcgatccagcgt
tcgccaacgcttgggatccagcgactgatgcggatttgcggcctcaccgagaaatcgcaa
ctcggggtcggcgatgtcgccttcacgctggccccgcgactgaacgcctgtggccgactc
gggcaagctcggcttgggatcgaactgctgacaaccggtgatccttcccgcgccaacgag
ttggccgcgtacctcgagaccgccaacaaggatcggcaaaccctcgaacgacgcgtcttc
accgaagcgaagaagctccacgaggagatggtcggcgaggagggtgacctcgcggcgatc
gtcctcgcgagcgaggagtggcacccgggcgtcgtcggcatcgtcgccagccggatggtg
gagcgtttccatcggccctgcatcctgatcgctctctccgaggaactcggcagcgggtcg
gcccggtcgattcccggtttcgatattcaggaagcgctgacgcactgccaagagcatctg
ctcacatgtggcggtcacgcgatggccgcgggaatgcgaatcacgcctgagaaaatcgac
gcctttcgcgagcgtttcaccgaggtggccgatcgtcggatcctgcccgaacagcgtgtg
ccggtgctgcggatcgacgtcgaagttcccctgcacacgctgaccaacgacttgattcgg
tcgctggcggtgatggagccttttggcctgtcgaacccctctcccgtgatgctcgccacg
gacctgcagttggtcggcgagcccaaatgcgtcggcggcgggggaaggcatttgagcttt
cgggtgcggcaaaacggcaaggcgatgaaagcgatcgccttcggcatggccgatcgggcc
gaggaactcgccagcgacaacggcaagtgctgcgtcgtcttcagtcccatcgtcaacgag
tttcgtggcttcaaggaagtcgaactgcaagtgaaagacttccgggccggttcaagggtc
accgattga
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