Kolteria novifilia: Pan216_25510
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Entry
Pan216_25510 CDS
T11180
Symbol
groL_2
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
knv Kolteria novifilia
Pathway
knv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
knv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pan216_25510 (groL_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
knv03019
]
Pan216_25510 (groL_2)
03110 Chaperones and folding catalysts [BR:
knv03110
]
Pan216_25510 (groL_2)
03029 Mitochondrial biogenesis [BR:
knv03029
]
Pan216_25510 (groL_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
knv04147
]
Pan216_25510 (groL_2)
Enzymes [BR:
knv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Pan216_25510 (groL_2)
Messenger RNA biogenesis [BR:
knv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Pan216_25510 (groL_2)
Chaperones and folding catalysts [BR:
knv03110
]
Heat shock proteins
HSP60 / Chaperonin
Pan216_25510 (groL_2)
Mitochondrial biogenesis [BR:
knv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Pan216_25510 (groL_2)
Exosome [BR:
knv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pan216_25510 (groL_2)
Exosomal proteins of other body fluids (saliva and urine)
Pan216_25510 (groL_2)
Exosomal proteins of breast cancer cells
Pan216_25510 (groL_2)
Exosomal proteins of colorectal cancer cells
Pan216_25510 (groL_2)
Exosomal proteins of bladder cancer cells
Pan216_25510 (groL_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CSN5_C
Motif
Other DBs
NCBI-ProteinID:
QDU61689
UniProt:
A0A518B3X7
LinkDB
All DBs
Position
3311854..3313473
Genome browser
AA seq
539 aa
AA seq
DB search
MGAKQIAFDQEAREVMRKGVSKLARAVRVTLGPKGRNVILEKSFGSPTVTKDGVTVAKEI
ELEDKYEDMGAKMVREVASKTSDVAGDGTTTATVLAEAIYNEGLKSVVAGLNPMLMKRGI
EKAVEDITAKLREMSIEVKSKKEMAQVATVASNGDDEIGKKIAEAMEKVGKDGVITIEEG
KGLETDIELVEGMQFDRGYLSPYFVTDPAKMECELEDPYVLIHEKKISNVKDLVPVLEKV
ANSGRPLLIIAEDIEGEALATLVINKLRGTFRCCAVKAPGYGDRRKAMLEDIAVLTGGQA
VFEDLGVQLENLDIAQLGQAKRVKVDKDNTTMIEGGGSSGDIKGRIEQIRAELENTSSDY
DREKLEERLAKLAGGVAKINVGAATESEMKEKKARVEDALHATRAAVEEGILPGGGVALV
RASASVKPKGLSHDEQAGYNIVLRAASAPLYWIATNAGEDGGVIVNKVKEAEGNEGFDAR
AGKMVDMVKQGIIDPTKVTRTALLNATSVSTLLLTSDALVSDLPKKDDKHGAPGMDDMY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgaaacagatcgcgtttgatcaggaagctcgcgaagtgatgcgcaagggcgtc
tccaagctcgcccgcgccgtccgcgttacgctcggccccaagggtcgcaacgtcatcctc
gagaagagcttcggctcccccaccgtcaccaaggacggcgtcaccgtcgccaaggagatc
gaactcgaggacaagtatgaggacatgggcgccaagatggtccgcgaagtcgccagcaag
accagcgacgtcgccggcgatggcaccaccaccgccacggtcttggccgaagcgatctat
aacgagggcctcaagagcgtcgtcgccggcctcaaccccatgctcatgaagcggggtatt
gagaaggcggtcgaagacatcaccgccaagctccgcgagatgtccatcgaagtcaaatcc
aagaaggagatggctcaagtcgccaccgtcgcctccaacggcgatgacgaaatcggcaag
aagatcgccgaagcgatggaaaaggtcggcaaggacggcgtcatcaccatcgaagagggc
aaaggcctcgagaccgacatcgaactcgtcgaaggcatgcagttcgatcgcggctacctc
tccccctacttcgtcaccgaccccgccaagatggagtgcgaactcgaggatccctacgtc
ctgatccacgagaagaagatctccaacgtcaaggacctcgtcccggtcctcgagaaggtc
gccaactccggccgcccgctgctgattatcgccgaggacatcgaaggcgaagccctcgcg
accctcgtcatcaacaagctccgcggcaccttccgctgctgtgcggtcaaggcccccggc
tacggcgatcgccgtaaggccatgctcgaggacatcgccgtcctcaccggcggccaagcc
gtcttcgaagacctcggcgtccaactcgagaacctcgacatcgcccaactcggccaggcc
aagcgggtcaaggtcgacaaggacaacaccaccatgatcgagggtggcggaagctccggc
gacatcaagggccgcatcgagcagatccgcgccgagctggaaaacaccagcagcgactac
gatcgcgagaaactcgaggagcgcctcgccaagctcgccggtggcgtcgccaagatcaat
gtcggcgccgcgaccgaaagcgaaatgaaggagaagaaggcccgcgtcgaggacgccctt
cacgccacccgcgccgccgtcgaggaaggcatcctccccggtggaggagtcgctctggtt
cgcgccagcgcctcggtcaagcccaaggggctaagccacgacgagcaagccggctacaac
atcgtccttcgcgcggcgtccgccccgctctactggatcgccaccaacgcgggcgaggac
ggcggcgtcatcgtcaacaaggtcaaggaagccgaaggcaacgaaggcttcgacgcccgt
gccggcaagatggtcgacatggtcaagcagggcatcatcgacccgaccaaggtcacccgc
accgcgctgctgaacgcgaccagcgtctcgaccctgctcctaaccagtgacgccctcgtc
tccgaccttcccaagaaggatgacaagcacggcgcccccggcatggacgacatgtattga
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