Kolteria novifilia: Pan216_37710
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Entry
Pan216_37710 CDS
T11180
Symbol
xcpQ
Name
(GenBank) Type II secretion system protein D precursor
Organism
knv Kolteria novifilia
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Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
STN
TPR_19
Motif
Other DBs
NCBI-ProteinID:
QDU62898
UniProt:
A0A518B7E5
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All DBs
Position
4886447..4892782
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AA seq
2111 aa
AA seq
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MRRARFFASALSVCVGLSATEFAWSQTSQPSQTRIVADTSEPGVELREGIRLFRRGDYEQ
SARAFRAAREGATRLSEKDREVLDDFQRRTRAALQSRAQAQAELGEAERAFKAGDHTTAF
NLVKRVTANRYLSEEERQRVDALGEELRGDKKQGFWSNVFRRRGDDSETVTVEKPKVEES
SIKAASHAEMVPTPPIPSQGETMTRTAARELLANGREWLSKGHLEQAERFAKEASRYQGY
WLFGDTPDKLLRDIEVARQQQPDGKETQGYSDGKKAKPSNGAPAEEAESSAPRGTSIRKS
DSSPSIAAAGSSNEINRQRALSLLREARRQMGAGQYDQARTLCLQAKQLNVMYRPFDETP
DKLLGYMKSAAPASGQPTPKNVDPEKARQQAQSLLVQAESSLRQGKLDQAEQYLKSAESL
AGKDANLGWKSSQLRKGLAFARQQKNAMNTAAKATASSAPSPKKQQAIKLVSEARKALNE
GQYPQAVALAQRAKAMNVTFADFEDSPERILQAHTALRKRTQDRKDPQSVQRRVAQARHL
MHRSRRLMKVGLLEEAAREAQLAAVLKAPLGKDEEKPEDLLVEIKRKLQERTDAGLAQTT
PTSAPPATSMPASNASLASATKPTSDWKASNPEGAAIKTQVESLIRAGKLQEAHGLAMKL
KSGNYNMHGEADTLLETIQKVDNRNKGLALLNKAKEAIDRGEKTQAKVYLTYAVRYSNSF
DATERRALADLSSMITTGQATPSTALASARTTKPATPVATRTTSALPKSATPVKPIPTST
AIATNMTGQSGASRIPVQTDATAAAKTVQPVVSLEPKAPQQVSTSSTKLVAQAKSPAKMP
STPVEKKESKPATTSVAKVTPKTTTPAPKATEKEQTEESGSLFGRFARSGKSKVRTGIGS
MKSIFGGKENEAEATSVAKAEPKTPTKSTKTKTPSKTSVASKTPVTEKAPGFATTSSLPA
PPTAVANKTAKPVKTTVASTMASSKTETVAPTMASSKTETVAPTMTSSKTKTVASTKSPK
TKTVAKVESKPAKSTMSVAELPPPPPIFGGLSKKASTPSPKMPETTAKVEQAIAQAKTPK
RTESLPKLDTFPKVDKVADTSKGGTTSDVASMSGVKTLPKVDKTSAPVEKVVETSKSVAK
MPEVSKQVVTSIAATTPVAKPAKESAPASTKGESMIPVEAAGASEPIPSVASKRTPEGMD
RDVVPTSSTPGRRSIADRQPAFQPATELPIGGPAMGANDFPTRFTQGKASVSDTAPAPAP
SGTAKTGTAPGATIPGARTTSDRDLIQESIRRERVLAQKLRQETINSLTRAGQLFTSEPE
SAIALLESTRATIKESALSSELTQPLVRQLDRRIQDYQNQRKRLEIENIAQRRSESIVEG
QLNKEQIDLQKQQQIKELSKRFNALMDEGRFSEAETVAYQVTEIDPDEVFGHAALWRARL
ARHYLLINEVEEKKQEGFWEAIYEVEKASIPRSDAEPLDFPDAKFWEDLTTLRAKYRDAV
DLTEKSEATRRIEQALKQPIDIDFQDTTLRDAVEFLQDSTGVNIVLDQNGLDILGLDPDV
PVTLSLQGVSLKSALRLILKPMELTFLIQDEVLLITDAQETGSELVTRVYPVADLVIPII
DFNSGGIGLAGSLGGGNAGQGALGGGGQGGGGLGGGGGGFGGGGGGFGGGGGGGGGFGGG
GGGGGFGGGGGGGGQGGLGQGDTGEDIAEDVMELIRTTIATDTWEENGGLGSIGYFEPNR
SFVVTQTQEVHEQLADMFTQLRRLQDLQITVEVRFVDVTEEFFERIGIDFDVTFDNNNDD
WIIQSDPTANQLSPPGNPLPLVNANNVAPAGPGNTARADGNHVRGVTVGRDPSGNFLQNF
NIPVSQSSFAQATVPALAGLGDTTLGGTNFGIAFLNDIDVFLLMEAVQGDRRQNLVTAPK
VTMFNGQTASVIVSRQVPFVTGATSNISAGAAAFDPTVSVINDGTTLQVQAVVSADRRFV
RIQVIPLIQSIEPGSTRQIEVGATAGGSGLVGSAGTATATIELPTVAVQSVQTTVNVPDG
GTILLGGLKTHQEARNEFGTPVLSKLPYVNRLFKNAASARISRSLMLMVTPRIIILEEEE
EKLGLETTFGL
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
ttgcgacgagcaagattcttcgcctccgcgttaagcgtgtgcgtcggcctgtcggcgact
gaattcgcttggtcacagaccagccaaccctcccagacgaggatcgttgccgacacgtcc
gaaccgggagtggaactgcgggaaggcattcggctcttccgccgaggcgattacgaacag
tcggcccgtgcattccgcgcggctcgagagggcgcgacgcgtctctccgagaaggaccga
gaagtcctggatgactttcaacgcaggacgcgtgccgccctgcagtcccgagcccaagct
caagccgagctcggtgaggccgaacgggcgttcaaggcgggggatcacaccaccgccttc
aacctcgtgaaacgagtcaccgcgaatcgctatctctccgaggaggaacgccaacgcgtt
gacgccctcggcgaggagctgcggggtgacaagaagcaaggcttctggtcgaatgtcttc
cgccgtcgtggcgatgacagcgagaccgtcaccgtggaaaagccgaaggtcgaggagagc
tcgatcaaagcggcttcccacgccgagatggtgccgacgccgccgattccctcccagggg
gagacgatgacgcggaccgcggcacgcgaacttctcgccaacggccgcgaatggctctcc
aagggtcatctcgagcaagccgaacgcttcgccaaggaagcctcgcgctaccaaggctac
tggctcttcggcgacacgcccgacaagctgcttcgcgacatcgaagtcgctcgccagcag
cagccggacggcaaggagactcaaggctactccgatggcaagaaggccaagccgtccaac
ggcgcgcctgccgaggaagccgagtcgtccgctccgcgcggcacctccattcgcaagagc
gactcctcgccgtcgatcgctgcggcgggatcctccaacgaaatcaaccgtcagcgagcc
ctcagcctcttgcgtgaggcccgccgacagatgggagctggtcagtacgaccaagcacgg
accctctgcttgcaagccaagcagctcaacgtgatgtaccggcccttcgacgagacgccg
gacaagctcctgggttacatgaagagcgccgcgcccgcttcgggacagccgacgccgaag
aacgtcgacccggagaaggctcgccagcaagctcagtcgttgctggttcaagccgagtcg
agcctgcgtcaaggcaagctcgatcaggccgagcagtatctgaagagcgccgagagcctc
gccggcaaggacgccaacctcggttggaagtcgagccagctccgcaagggcttggcgttc
gctcgccagcaaaagaacgcgatgaacaccgccgcgaaggcgacggcgtcttccgcgcct
tcgccgaagaagcagcaggccattaagttggtcagcgaggcgcgtaaggccctcaacgaa
ggccagtacccgcaagcggtcgcgcttgcccaacgtgccaaggcgatgaacgtcacgttc
gccgacttcgaggattctccggagcggattcttcaagcccacaccgcccttcgcaagcgg
acgcaggatcgtaaggatccccagtcggtccaacggcgggtcgcccaggctcggcacctc
atgcatcggtcccgtcgactgatgaaggtcggtctccttgaggaagccgcccgcgaggcg
cagcttgccgcggtgctcaaggcgcctctcggcaaggacgaggagaagcccgaggatctg
ctcgtcgagatcaaacggaaacttcaggagcgtacggacgccggtttggcccagaccacg
ccgacgagtgctccaccggccacgtcaatgcccgcgagcaacgcttcgctcgccagcgcc
accaagccgacgagcgactggaaggcttccaaccccgagggggcggcgatcaagacgcag
gtcgagagcttgatccgcgccggcaagcttcaggaggctcacggcctcgcgatgaagctg
aagtcgggcaactacaacatgcacggcgaagccgacacattgctcgagacgattcagaag
gtcgacaaccgtaacaagggactcgccctactgaacaaggcgaaggaagcgattgatcgt
ggcgagaagactcaagcgaaggtctacctcacctatgccgttcgctactcgaattcgttc
gacgcgacggaacggcgggctctcgcggatctctcgtcgatgatcaccaccggccaggcg
acaccgtcgaccgcattggcttcggcccgcacgaccaagccggccaccccggtcgcaacg
cggacgacttcggccctgcccaagtccgcgactcccgtcaaaccgattccgacgtcgacg
gcgatcgcgacgaacatgacgggacagagcggagcgagccgcattccggttcaaaccgac
gcgactgccgcggcgaagacggtccaaccggtcgtctcgctcgagcccaaggctccccag
caggtctcgacctcctcgaccaagctcgtcgcccaggcgaagagccccgcgaagatgccg
agcaccccggtggaaaagaaggaatccaagccggccacgaccagcgtcgcgaaggtgacg
cccaagacgacgactcccgcccccaaggcgaccgaaaaggagcagaccgaggaatcggga
tcgctcttcggacggttcgcccgctcgggcaagtcgaaggtccgtaccggcatcggctcg
atgaagtcgatcttcggtggcaaggagaacgaggccgaagcgaccagcgtcgccaaggcg
gagcccaagactcccaccaagtcgaccaagaccaagacgccgagcaagacgagcgttgcc
tcgaagactccggtgaccgagaaggctccgggcttcgcgacaacgagttcgctgcccgct
cctcccacggcggtcgcgaacaagacggccaagccggtcaagacgacagtcgcttcgacg
atggcgtcttccaagaccgagaccgtcgccccgacgatggcgtcttccaagaccgagacc
gtcgccccgacgatgacgtcttccaagaccaagaccgtcgcttcgacgaagtcgccgaag
accaagaccgtcgccaaggtggagtcgaagccggccaagtcgacgatgtcggtcgcggag
ctacctccgccgccgccgatcttcggtgggctctcgaagaaggcaagcacgccttcgccg
aagatgccggagacgacggccaaggtcgagcaggcgatcgcccaggcgaagacgccgaag
cgaaccgaatcgctgcccaagctcgataccttcccgaaggtcgacaaggtcgccgacacc
tcgaaggggggaacgacgtccgacgtcgcctcgatgagtggtgtgaagactctgcccaag
gtcgacaagacctcggccccggtcgagaaggtggtcgaaacgagcaagagcgtcgccaag
atgccggaagtcagcaagcaagtcgtgacgtccatcgccgcgacgacgcctgtggcgaag
ccggccaaggaatcggcccccgccagcaccaagggcgagagcatgattccggtcgaggcg
gctggtgcgagcgagccgatcccgagcgtcgcgtccaagcggacgcccgaggggatggac
cgcgacgtggtgccgacctcgtcgacgcccggtcgacgcagcatcgcggatcgtcaaccg
gcattccaaccggccacggaacttccgatcggtggtccggcgatgggagccaacgacttc
ccgactcgcttcacgcagggcaaggccagcgtgagtgatacggccccggccccggctccc
agcggtacggccaagaccgggaccgctcccggcgccacgatcccgggagctcggacgacc
tccgatcgcgacttgatccaggagtcgatccgacgcgaacgggtgctcgcccagaaactg
cgtcaggagacgatcaactcgctgacccgggcgggccagctcttcaccagcgaacccgag
tcggccatcgcgctgctcgagtcgacccgtgcgacgatcaaggagtcagccctcagttcc
gagctgacccaaccgctggtccgccagctcgatcgccgcatccaggactaccagaaccag
cgtaagcggctggagatcgagaacatcgcgcaacgtcgttccgagtccattgtcgaggga
cagcttaacaaggagcagatcgacctgcaaaagcagcagcagatcaaggagctcagcaag
cggttcaacgccctgatggacgaggggcgcttctcggaggccgagacggtcgcctaccaa
gtgaccgagatcgaccccgacgaggtgttcggccacgccgccctgtggcgtgcccgactc
gcgcggcactatctcctgatcaacgaggtcgaggagaagaagcaggaagggttctgggaa
gcgatctacgaggtcgaaaaggcttcgattccgcgatcggacgccgaacccttggacttc
cccgatgcgaagttctgggaagacctgaccacgctgcgggcgaagtaccgcgacgcggtc
gacctgaccgagaagagcgaagcgacccgtcggatcgaacaggctctcaagcagccgatc
gacatcgacttccaggacacgacgcttcgtgacgcggtcgagttcctccaggactcgacg
ggcgtgaacatcgtgctcgaccaaaacggtctggatatcctcgggctcgatccggatgtc
cccgtgacgctctcgctccagggagtctccctgaagagtgcgttgcggctgatcctcaag
ccgatggagttgacgttcctgatccaggatgaggtgctcctcatcacggatgcccaggaa
accggaagcgagctcgtcacccgagtctacccggtggcggacctcgtcatcccgatcatc
gacttcaacagtggcggcatcggtctggcgggatctcttggcggcggcaacgccggtcaa
ggtgctctcggcggcggtggccaaggcggtggcggcttgggcggaggtggcggcggcttc
ggtggaggcggcggcggcttcggtggaggcggcggcggaggcggtggcttcggcggcggc
ggcggaggcggtggcttcggcggcggcggcggaggcggcggccagggtggtctcggccag
ggcgacaccggtgaggacatcgccgaggacgtcatggagctcatccgcaccacgatcgcg
accgacacctgggaagagaatggtggactcggttccatcgggtacttcgaacccaaccgg
agcttcgtcgttacccagacccaggaggtccacgagcaactcgccgacatgttcacgcag
ttgcgtcgtctccaggacctgcagatcaccgtcgaggttcgctttgtcgacgtgaccgag
gagttcttcgagcggatcggtatcgacttcgacgtgacgttcgacaacaacaacgacgac
tggatcattcagtccgatccgactgccaaccagctcagccctccgggcaacccactgccg
ttggtcaatgccaacaacgtggcccccgcgggaccgggcaacaccgcccgcgccgatggc
aaccatgtccgtggcgtgacggtcggtcgggatccgtcgggtaacttcctgcagaacttc
aacatcccggtctcgcagtcgtcctttgcccaggcaacggtccctgctctggccggtttg
ggtgacacgacccttggaggtaccaacttcgggatcgcgttcctgaacgacatcgacgtc
ttcctgctgatggaagccgtccagggtgatcgtcgccagaacttggtgacggctcccaag
gtgacgatgttcaacggccaaaccgccagcgtcatcgtctcgcgtcaggtgccgttcgtc
acgggggcgacctcgaatatctccgcgggggcggcggccttcgatccgaccgtcagcgtc
atcaacgacggtacgaccctccaggtccaagcggtggtgtcggccgaccgacgcttcgtc
cggatccaggtcatcccgctcatccagtcgatcgagcctggctcgacgcgacagatcgaa
gtcggggcgaccgcgggtggctcgggactcgtcggatcggcgggaacggcgacggcgacg
atcgaactgccgaccgtcgcggtccagtcggttcagacgaccgtcaacgtgcccgacggc
ggaacgatcctcctcggtggtctcaagacgcaccaggaagctcgcaacgaattcggcacg
ccggtcctgagcaagctgccgtacgtcaaccgtctcttcaagaatgcggccagtgcccgt
atctcgcgaagcttgatgctgatggtcaccccgcggatcatcatcctcgaggaagaggaa
gagaaactcggcctggaaaccacgttcgggctctaa
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