Kolteria novifilia: Pan216_49260
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Entry
Pan216_49260 CDS
T11180
Symbol
yhaM_2
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
knv Kolteria novifilia
Brite
KEGG Orthology (KO) [BR:
knv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
knv03019
]
Pan216_49260 (yhaM_2)
Messenger RNA biogenesis [BR:
knv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Pan216_49260 (yhaM_2)
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
tRNA_anti_2
TraI_2
RMI2
Motif
Other DBs
NCBI-ProteinID:
QDU64038
UniProt:
A0A518BAN8
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Position
6382629..6383642
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AA seq
337 aa
AA seq
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MTRCYVRDLVDGDAVDRVLLVRDKQVRANRNGNLYLQFNLDDRTGTIAARYWNSSESETR
AFEPGDFLSVRGKVQTFQGQLQLIVNAFRRCDPDTVDAADFIPTTEKNVDAMMNRVRGYL
ERIGDPTMQAIARSFLMDDEFMQKFMRAPAGIRNHHAYVGGLLEHVTTLLDIHERISDLY
PDLDHDLLRLGILLHDVGKVRELAFDRVFSYTDVGEMIGHLVLGVEMLDEKLPVAEDLLG
EPLSQEVVCRIKHLILSHHGTYEFGSPRLPMTPEAIALHHLDNLDAKVHGYVHMIREDAN
PGSAWTAYDPSMRRRLYKGPLAHTGSSSLHENPDSAK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacccgctgctacgttcgagacctcgtcgatggagatgctgtggaccgcgtgctgctt
gtccgcgacaagcaagttcgcgccaatcgcaacggcaatctctatctccaattcaacctc
gatgaccgcaccgggaccatcgccgcgcggtactggaactccagcgaatcggagacccgc
gcctttgaaccgggcgatttcctctcggtccgtggcaaggtgcagaccttccaaggtcag
ctccagctcatcgtcaatgcctttcgccgttgcgatcccgataccgtcgacgccgccgac
ttcatcccgaccacggaaaagaacgtcgacgcaatgatgaaccgcgtccggggctatctc
gagcgcatcggcgacccgacgatgcaggcgatcgcccgctcgttcctgatggacgacgag
ttcatgcagaagttcatgcgggcgccggccggcatccgcaatcatcacgcctacgtcggc
ggtttgctcgaacacgtgacgacgctcctggatatccacgagcgaatctcggacctttac
cccgacttggaccacgatctcttgcggttgggaatcctgctgcacgatgtcggcaaggtg
cgcgaactcgcgttcgatcgcgtcttctcctacaccgacgtcggcgagatgatcggtcac
ctcgtcctcggcgtggagatgctcgacgaaaagctgccggtcgcggaggacttgctcggc
gagcccctctcccaagaggtcgtttgccgcatcaagcacctcatcctcagccaccacgga
acgtacgagtttggaagcccgcggctgccgatgacgcccgaagcgatcgcgctgcaccac
ctcgacaatctcgatgccaaggtccacggctacgtccacatgatccgcgaagacgccaat
cccggttcggcgtggaccgcttacgatccctcgatgcgtcgacggctctacaaggggccc
ctcgcgcataccggaagcagttccctccacgagaaccccgactcggcgaaatag
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