Kolteria novifilia: Pan216_54380
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Entry
Pan216_54380 CDS
T11180
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
knv Kolteria novifilia
Brite
KEGG Orthology (KO) [BR:
knv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
knv03016
]
Pan216_54380 (truB)
Enzymes [BR:
knv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pan216_54380 (truB)
Transfer RNA biogenesis [BR:
knv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pan216_54380 (truB)
Prokaryotic type
Pan216_54380 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QDU64548
UniProt:
A0A518BC32
LinkDB
All DBs
Position
complement(7087570..7088478)
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AA seq
302 aa
AA seq
DB search
MDSFYLAIDKPGAMSSRRVVDIVGRCVGTRKVGHAGTLDPLATGVLVTAIGRATRLVEYV
QRMPKTYEAEFQLGATSDTDDIEGEVHVREDVVMPDEATIRKALEPFVGTIDQVPPAYSA
LKLEGRRAYDLARRGEEVVLNARPVTIHAITLLGLELPRLRLRIECGSGTYIRSLARDLG
ERLGTGGLMSALRRTAIGSFVAERAVTIDELSTGAWREKIEPLEKGVEHLPRLVIAPEKT
WAFSQGQHVAQAESTLRAGQECAAFTSDDHFLGIAQMKQAPEGFACHLKKGGFLEVPRMD
VP
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggacagtttctatcttgcgattgataagcccggcgcgatgagttcgcgccgcgtcgtc
gacatcgtcggtcgttgcgtcggcacgcgaaaggtcggccatgccggcaccctcgacccg
ctcgccaccggcgttctcgtcaccgcgatcggccgagcgacgcgcctggtcgagtacgtg
cagcggatgccgaagacctacgaggccgagttccagctaggggcgacgagcgacaccgat
gacatcgagggagaggtgcacgttcgcgaggatgtcgtcatgcccgacgaggcgaccatt
cgcaaagccctcgaaccgtttgtgggaacgatcgaccaggtgccgcccgcctactcggct
ctcaaacttgaggggcgtcgagcctacgacttggcgcggcgcggcgaagaggtcgtgctt
aacgctcggccggtgaccatccacgccatcacccttctggggttggaactaccgaggctc
cggctgcgtatcgaatgcggtagtggtacctacatccgctccttggctcgcgatcttggt
gagcgacttggcacggggggactgatgtccgcgctgcgccggacggcgattggatcgttt
gtcgccgagcgtgccgtgacgatcgacgagctctccacgggggcgtggagggagaagatc
gagccgctggaaaagggtgtggagcatcttccgcgactcgtgatcgctccggagaagact
tgggcattttcccagggccaacacgtcgcgcaagcggagtcgacgcttcgcgccgggcaa
gagtgcgccgcgttcaccagcgacgaccacttcctcggcatcgcgcagatgaaacaggcc
cccgaagggttcgcctgtcacttgaagaaggggggctttctagaggtcccccgtatggat
gtaccatga
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