Kolteria novifilia: Pan216_57310
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Entry
Pan216_57310 CDS
T11180
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
knv Kolteria novifilia
Pathway
knv03030
DNA replication
knv03430
Mismatch repair
knv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
knv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pan216_57310 (dnaE)
03430 Mismatch repair
Pan216_57310 (dnaE)
03440 Homologous recombination
Pan216_57310 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
knv03032
]
Pan216_57310 (dnaE)
03400 DNA repair and recombination proteins [BR:
knv03400
]
Pan216_57310 (dnaE)
Enzymes [BR:
knv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pan216_57310 (dnaE)
DNA replication proteins [BR:
knv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pan216_57310 (dnaE)
DNA repair and recombination proteins [BR:
knv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pan216_57310 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF6282
Motif
Other DBs
NCBI-ProteinID:
QDU64838
UniProt:
A0A518BCX6
LinkDB
All DBs
Position
complement(7474246..7477782)
Genome browser
AA seq
1178 aa
AA seq
DB search
MSSGSFVHLHCHSHFSLLDGAAKVNDLVGQAKSQGMNALALTDHGNLYGAIEFYDACREA
EINPILGYEAYVSPAHRTDRQARGGQGGEASFHLTMLATNRVGFQNLIKLSSQAFLEGFY
YKPRIDKELIEAHHEGLVVLSGCAASEFSSLILGGKRNEARHLAEWFAKLFGEERFFIEI
QDNGLEIQRECADGAIEIANKMGLNLVATCDTHYLCQEDSYAHEVLLCINTGKTMSDPKR
MQYGSNEFYLKSAEEMYAAFPDHPQAVDQAQKIADSIDIDLDFSKRHFPVFLPPENKTDK
DYLLERCKIGFEERFPNTDYPDGPTDAHWQRLDMELGVINKLGFASYFLIVWDFVQFSLD
NGIPCGARGSGCGALVAYLLGFSNVDPLKYDLLFERFLDPNRKEAPDIDIDFCQERREEV
IEYVRQKYGEQNVAQIITFGTMAARAVVRDVGRALEYPLATVDQIAKMIPALPKMTLEKA
LDQSPDLKAAYDSDSETKRLIDVGRRLEGLARNPGTHAAGVVVADEELSSIIPLQKNGEI
VTTQWEMTILEQVGMLKFDFLGLRNLTILSRAVEIIQHVRGIEMDVLTIPLTDKETYDLL
QRGETKGVFQLESEGIRGLLMRMKPDRFDDIIATAALYRPGPLGGGMVDQYVNVKHGREQ
PEYAHDVLKGILEETYGVMVYQEQVMRILNRLGGIELADAYKCIKAISKKKMEVIAKYRS
QFIEGAESCGLKGSKAEEIFKLIEHFAGYGFNKSHSTAYALVAYQTAYLKAHYPAEFMAA
LLSSEIDKTDMLVEHIDDCRRMGIEVKPPDVNEGEVGFTVVEGVIRFGLAAIKGAGEKAI
EAIVAERDKDGRYRDFFDFLERIDTKLVNKSCIEALIKAGAFDSMGVFRSQLQEALPMAL
QAAAFARDARSSGQGFLFDGEDEVSAEETNQSLPQIDEWSDKEKLAHEKSVLGIFLSSHP
LAEHQRTLRIYRTHEIAQLDSLTDRTPVTIGGMITGVRTMIQQRGRNANKAYARFMFEDL
GKSIGCVMFADSYAEWKEKIVNDSIGFLIASVDKSRDEVGLIADEWIDLEQASKRLSGTL
SVRVNSAKHESDSIDQLANILKGRQGNSPVMLEVSSPEGVEAQLRVGDGFKVCLDSELMQ
QIEGLLGEGSVSIGPAMAPSNGNGNGHSNGNGHRRRRG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaggctccttcgtccatttacattgccacagtcacttcagcctgcttgacggc
gcggccaaggtcaacgacctggtcggacaggccaagtcgcagggaatgaacgccttggcc
ctgaccgatcacggcaacctctacggggcgatcgagttctacgacgcgtgccgggaggcc
gagatcaatcccatcctcggttacgaagcctatgtctccccggctcaccggaccgatcgt
caagctcgcggtggccaagggggcgaggccagtttccacctgacgatgctcgcgaccaat
cgcgtcggcttccaaaatctgatcaaactctcctcgcaggctttcctcgagggcttctac
tacaagccccggatcgacaaggaactgatcgaagcgcaccatgagggcctggtcgtcctc
tccgggtgcgccgccagcgaattcagcagcctgatcctgggcggaaaacgcaacgaagcc
cgccatttggcggagtggttcgcaaagctctttggagaagagcggtttttcatcgaaatt
caggacaacggactcgaaattcagcgcgagtgcgccgacggggccatcgaaatcgccaac
aagatgggcctgaatctcgtggccacttgcgatacccactacctctgccaggaggactcc
tacgctcacgaggtactgctctgcatcaataccggcaagaccatgtcggaccccaaacgg
atgcagtacggcagcaacgaattctatctcaagtccgccgaggaaatgtacgccgccttt
ccggatcacccccaggcggtcgaccaggcccaaaagatcgccgactcgatcgacatcgat
ctcgactttagcaaacgccactttccggtctttctcccacccgaaaacaagaccgataaa
gactacctcctcgagcggtgcaaaatcggattcgaggagcgttttcccaacaccgactac
cccgacggacccaccgacgctcactggcagcgtctggacatggaactcggcgtcatcaat
aagctcgggttcgccagctacttccttatcgtttgggacttcgtgcagttctcgctcgat
aacggaatcccttgcggcgcccgtggttccggttgcggcgctcttgtcgcgtacctcctc
gggttctccaatgtcgacccgctcaagtatgacctgctcttcgagcgctttctggacccc
aatcgaaaagaagcgcccgatatcgacatcgacttctgccaggaacggcgcgaagaggtc
atcgagtacgttcgtcaaaaatacggcgaacagaatgtcgctcagatcatcacgttcggc
acgatggcggcccgggccgtcgtccgcgatgtcgggcgcgccctggagtatcccctcgcg
accgtcgaccagatcgccaagatgatcccggccctgccgaagatgacactcgagaaggcg
ctcgatcaatcccccgacctcaaggccgcctacgacagcgactccgagaccaaacggctg
atcgatgtcggccgtcgcctcgagggcctcgcgcgcaatcccggcacccacgccgcgggc
gtcgtcgtcgccgacgaggaactctcgtcgatcatcccccttcagaagaacggcgagatc
gtcaccacgcaatgggaaatgacgattctcgagcaagttgggatgctcaagttcgatttc
ctcggactgcgcaacctgacgattctgagccgagccgtcgagatcatccaacatgtccgc
gggatcgagatggacgtgctcaccatcccgctgaccgacaaggagacctacgacctcctc
cagcgaggagagaccaagggcgtgttccagctcgaaagcgaaggcatccgcgggcttctg
atgcggatgaagcccgaccgcttcgacgatatcatcgcgaccgccgccctctaccgtcct
ggaccgctcggcggcggtatggtcgaccagtacgtcaacgtcaagcacggccgcgagcaa
cccgagtacgcccacgacgtgctcaagggcatcctggaagagacctacggcgtcatggtc
taccaggaacaggtcatgcgaatcctcaatcgcctcggtggcatcgaactggccgatgcc
tacaagtgcattaaggcgatcagcaaaaagaagatggaggtcatcgcgaagtatcgctcg
cagtttatcgaaggcgcggaaagctgcgggctcaagggctcgaaagcggaagagatcttc
aaactgatcgagcacttcgccggctatggttttaacaagagccattcgaccgcgtacgcc
ctggtggcgtaccagacggcttacctcaaggcgcactaccccgccgaattcatggcggcc
ctgctctccagtgaaatcgacaagaccgacatgctcgtcgagcacatcgacgactgtcgc
cgcatggggatcgaggtcaagccgcccgacgtcaacgaaggggaagtcggcttcacggtg
gtcgaaggagtcattcgtttcggcctggccgccatcaagggggcgggagagaaggcgatc
gaggcgattgtcgccgaacgcgacaaggatggacgctaccgggacttcttcgacttcctg
gagcggatcgataccaaactcgtcaacaagtcctgcatcgaggctctcatcaaggcggga
gcctttgacagcatgggagtcttccgctcgcaattgcaggaggcgctccccatggcgctg
caagcggccgcgttcgctagggacgctcgatccagcgggcaggggttcctgtttgatggc
gaagacgaggtgtcggccgaggagacgaaccagtcgttgccacagatcgacgaatggtcg
gacaaggagaaactcgcccacgagaagtcagtcctgggcatctttctctcgagtcatccc
ctcgcggaacatcagcgaacgctacggatctaccgcacccacgagatcgctcagctcgat
tcgctcaccgaccgcacgccggtcaccatcggggggatgatcacgggcgtgcggacgatg
atccagcagcgcggccgcaacgccaacaaggcctacgcccgcttcatgttcgaggacctt
ggcaagtcgatcgggtgcgtgatgttcgccgactcctacgccgagtggaaggagaagatc
gtcaacgattcgatcggcttcctgatcgcctcggtcgacaagagtcgcgacgaggtcggt
cttatcgccgacgagtggatcgacctagagcaggcttccaaacggctttcgggaacgctc
agcgtccgggttaactcggcgaagcacgagtccgactcgatcgatcaactcgcgaacatc
ctgaaaggtcgccagggcaattcgccggtgatgctcgaggtgagttctcccgagggggtc
gaagcgcaactccgtgtcggcgacgggttcaaggtctgcctggacagcgaactcatgcag
cagatcgaagggttgctgggagaagggtcggtttccatcgggcccgcgatggccccttcc
aatggcaacggcaatggtcactccaacggcaacggacatcgccgccgtcgtggatag
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