KEGG   PATHWAY: ko03060
Entry
ko03060                     Pathway                                
Name
Protein export
Description
The protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the general protein export system that transports newly synthesized proteins into or across the cell membrane. The translocation channel is formed from a conserved trimeric membrane protein complex, called the Sec61/SecY complex. The twin-arginine translocation (Tat) pathway is another protein transport system that transports folded proteins in bacteria, archaea, and chloroplasts. Many Tat systems comprise three functionally different membrane proteins, TatA, TatB, and TatC, but TatA and TatE seem to have overlapping functions, with TatA having by far the more important role.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
ko03060  Protein export
ko03060

Other DBs
GO: 0043952 0043953
Orthology
K01551  arsA, ASNA1, GET3; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
K01983  ffs; signal recognition particle 4.5S RNA
K03070  secA; preprotein translocase subunit SecA [EC:7.4.2.8]
K03071  secB; preprotein translocase subunit SecB
K03072  secD; preprotein translocase subunit SecD
K03073  secE; preprotein translocase subunit SecE
K03074  secF; preprotein translocase subunit SecF
K03075  secG; preprotein translocase subunit SecG
K03076  secY; preprotein translocase subunit SecY
K03100  lepB; signal peptidase I [EC:3.4.21.89]
K03101  lspA; signal peptidase II [EC:3.4.23.36]
K03104  SRP14; signal recognition particle subunit SRP14
K03105  SRP19; signal recognition particle subunit SRP19
K03106  SRP54, ffh; signal recognition particle subunit SRP54 [EC:3.6.5.4]
K03107  SRP68; signal recognition particle subunit SRP68
K03108  SRP72; signal recognition particle subunit SRP72
K03109  SRP9; signal recognition particle subunit SRP9
K03110  ftsY; fused signal recognition particle receptor
K03116  tatA; sec-independent protein translocase protein TatA
K03117  tatB; sec-independent protein translocase protein TatB
K03118  tatC; sec-independent protein translocase protein TatC
K03210  yajC; preprotein translocase subunit YajC
K03217  yidC, spoIIIJ, OXA1, ccfA; YidC/Oxa1 family membrane protein insertase
K03425  tatE; sec-independent protein translocase protein TatE
K07342  SEC61G, SSS1, secE; protein transport protein SEC61 subunit gamma and related proteins
K09481  SEC61B, SBH2; protein transport protein SEC61 subunit beta
K09490  HSPA5, BIP; endoplasmic reticulum chaperone BiP [EC:3.6.4.10]
K09540  SEC63, DNAJC23; translocation protein SEC63
K09647  IMP1; mitochondrial inner membrane protease subunit 1 [EC:3.4.21.-]
K09648  IMP2; mitochondrial inner membrane protease subunit 2 [EC:3.4.21.-]
K10956  SEC61A; protein transport protein SEC61 subunit alpha
K12257  secDF; SecD/SecF fusion protein
K12272  SRPRB, SRP102; signal recognition particle receptor subunit beta
K12275  SEC62; translocation protein SEC62
K12946  SPCS1; signal peptidase complex subunit 1 [EC:3.4.-.-]
K12947  SPCS2, SPC2; signal peptidase complex subunit 2 [EC:3.4.-.-]
K12948  SPCS3, SPC3; signal peptidase complex subunit 3 [EC:3.4.-.-]
K13280  SEC11, sipW; signal peptidase I [EC:3.4.21.89]
K13301  secM; secretion monitor
K13431  SRPR; signal recognition particle receptor subunit alpha
K16365  SGTA; small glutamine-rich tetratricopeptide repeat-containing protein alpha
K22384  GET1, WRB; tail-anchored protein insertion receptor
K22386  GET2; GET complex subunit GET2
K23387  GET4; golgi to ER traffic protein 4
K23388  UBL4; ubiquitin-like protein 4
K23390  BAG6; large proline-rich protein BAG6
K27163  SND1; SRP-independent targeting protein 1
K27164  SND2, TMEM208; SRP-independent targeting protein 2
K27165  SND3, PHO88; SRP-independent targeting protein 3
Reference
  Authors
Dalbey RE, Robinson C.
  Title
Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane.
  Journal
Trends Biochem Sci 24:17-22 (1999)
DOI:10.1016/S0968-0004(98)01333-4
Reference
  Authors
Berks BC, Sargent F, Palmer T.
  Title
The Tat protein export pathway.
  Journal
Mol Microbiol 35:260-74 (2000)
DOI:10.1046/j.1365-2958.2000.01719.x
Reference
  Authors
Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T.
  Title
TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export.
  Journal
J Biol Chem 275:16717-22 (2000)
DOI:10.1074/jbc.M000800200
Reference
  Authors
Jongbloed JD, Martin U, Antelmann H, Hecker M, Tjalsma H, Venema G, Bron S, van Dijl JM, Muller J.
  Title
TatC is a specificity determinant for protein secretion via the twin-arginine translocation pathway.
  Journal
J Biol Chem 275:41350-7 (2000)
DOI:10.1074/jbc.M004887200
Reference
  Authors
Rapoport TA
  Title
Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes.
  Journal
Nature 450:663-9 (2007)
DOI:10.1038/nature06384
Reference
  Authors
Flower AM
  Title
The SecY translocation complex: convergence of genetics and structure.
  Journal
Trends Microbiol 15:203-10 (2007)
DOI:10.1016/j.tim.2007.03.001
Reference
  Authors
Osborne AR, Rapoport TA, van den Berg B
  Title
Protein translocation by the Sec61/SecY channel.
  Journal
Annu Rev Cell Dev Biol 21:529-50 (2005)
DOI:10.1146/annurev.cellbio.21.012704.133214
Reference
  Authors
Paetzel M, Karla A, Strynadka NC, Dalbey RE
  Title
Signal peptidases.
  Journal
Chem Rev 102:4549-80 (2002)
DOI:10.1021/cr010166y
Reference
  Authors
Paetzel M, Dalbey RE, Strynadka NC
  Title
The structure and mechanism of bacterial type I signal peptidases. A novel antibiotic target.
  Journal
Pharmacol Ther 87:27-49 (2000)
DOI:10.1016/S0163-7258(00)00064-4
Reference
  Authors
Ng SY, Chaban B, VanDyke DJ, Jarrell KF
  Title
Archaeal signal peptidases.
  Journal
Microbiology 153:305-14 (2007)
DOI:10.1099/mic.0.2006/003087-0
Reference
  Authors
Desvaux M, Hebraud M, Talon R, Henderson IR
  Title
Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue.
  Journal
Trends Microbiol 17:139-45 (2009)
DOI:10.1016/j.tim.2009.01.004
Reference
  Authors
Nakatogawa H, Murakami A, Ito K
  Title
Control of SecA and SecM translation by protein secretion.
  Journal
Curr Opin Microbiol 7:145-50 (2004)
DOI:10.1016/j.mib.2004.01.001

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