Kingella oralis: H3L93_00560
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Entry
H3L93_00560 CDS
T06724
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
koa
Kingella oralis
Pathway
koa03030
DNA replication
koa03430
Mismatch repair
koa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
koa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3L93_00560 (dnaQ)
03430 Mismatch repair
H3L93_00560 (dnaQ)
03440 Homologous recombination
H3L93_00560 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
koa03032
]
H3L93_00560 (dnaQ)
03400 DNA repair and recombination proteins [BR:
koa03400
]
H3L93_00560 (dnaQ)
Enzymes [BR:
koa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H3L93_00560 (dnaQ)
DNA replication proteins [BR:
koa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H3L93_00560 (dnaQ)
DNA repair and recombination proteins [BR:
koa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H3L93_00560 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QMT42904
LinkDB
All DBs
Position
complement(109426..110160)
Genome browser
AA seq
244 aa
AA seq
DB search
MTPAHPRQIILDTETTGFYHSAAENPDRLIEFAGLEMVNRQLTENTLHLYIHPQRDIPAE
AAAIHGITLDQLEGKPVFAQVAQQIFDFLKGAELIIHNAKFDIGFLNAEFARVGLPPIDS
VCSVIDTLEMARNKYPGQKNNLDALCNRLGVDRSRRVLHGALIDCELLGGVYLAMTRNQF
SLTDVLEDEAETAAPAAQTTAAPAPVFRADSLIVLHADADEAAAHEAYLDGLGSECVYRQ
PENE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaccccagcccacccccgccaaatcatcctcgacaccgaaaccacaggcttctaccac
tccgccgccgaaaaccccgaccgcctgattgaattcgcggggctggaaatggtgaaccgc
cagctcaccgaaaacaccctccatctctacatccacccccagcgcgacatccccgccgaa
gccgccgccatccacggcatcacgctagaccaacttgaaggcaagcccgtttttgcccaa
gtcgcccaacaaatcttcgattttctcaaaggcgcggagctcatcatccacaacgccaaa
ttcgacatcggctttctcaacgccgaattcgcccgcgtcgggctgcccccgattgacagc
gtgtgcagcgtcatcgacacgctggaaatggcgcgcaacaaatacccggggcaaaaaaac
aacctagacgcgctgtgcaaccgcttgggcgtggacagaagccgccgcgtgctgcacggc
gcgctcatcgactgcgaactgctcggcggcgtgtaccttgccatgacgcgcaaccaattc
agcctgaccgacgtgctggaagacgaagcagaaaccgccgcgcccgccgcccaaacaacc
gccgcccccgcacccgtcttccgcgccgacagccttatcgtgctgcacgccgatgccgat
gaagccgccgcccacgaagcctatttggacggtttgggcagcgaatgcgtgtatcggcag
cctgaaaacgagtga
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