Kingella oralis: H3L93_02390
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Entry
H3L93_02390 CDS
T06724
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
koa
Kingella oralis
Pathway
koa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
koa00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H3L93_02390 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
koa03021
]
H3L93_02390 (rpoD)
Transcription machinery [BR:
koa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H3L93_02390 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
TLP-20
GTP_EFTU
MitMem_reg
Motif
Other DBs
NCBI-ProteinID:
QMT43214
LinkDB
All DBs
Position
complement(446106..448070)
Genome browser
AA seq
654 aa
AA seq
DB search
MSEKHLPEQENEETLSNDNRPLTPEEQRERLRRLIIQGKERGYITYAEINDALPDDMSDA
EQIDNIVNMIQGLGIQVTEEAPDADSLLMNDNSTAITDEDAVAEAEAALSQADSEFGRTT
DPVRMYMREMGQVDLLTREDEIKIAKEIENALKNMIQAISACPGSIGEILDLINQIKKDE
IKVDEVVEAIIDPNEVLLNELGLGHLESSLNSHQAASGDESDESDGDESGDDDDSEGDSA
AIESQNLEELKAQVLDHFKQIEKSYNLMIRALDKSGSSSAKYLEHRGNIANKLLEVRFST
RQIEKLSDSLRSRVEKIRKLEREIRDICLDRVNMDRDHFIAHFLPNATNLDWIEEEIAKK
RAWSETLDRFRHAILEKQTEMAELEQHARVSIAELKDISKNMVKSEKETAAAKQKMIQAN
LRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSI
ADQARTIRIPVHMIETINKMNRISRQYLQETGEDPDSAKLAELMEMPEDKIRKIMKIAKE
PISMESPIGDDDDSHLGDFIEDVNNVAPAEAAMYSSLREVTAGVLESLTPREAKVLRMRF
GIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPTRSDKLKSFLDSEEGK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaacacctccccgaacaagaaaacgaagaaaccctcagcaacgacaaccgc
ccgctcaccccagaagagcaacgcgaacgcctgcgccgcttaatcatccaaggcaaagag
cgcggctacatcacctacgccgaaatcaacgacgccctgcccgacgacatgtccgatgcc
gagcagattgacaacatcgtcaacatgattcaaggcttgggcatccaagtaaccgaagaa
gcccccgatgccgacagcctgctgatgaacgacaacagcaccgccatcaccgacgaagat
gccgttgccgaagccgaagccgcgctctcgcaagccgattccgaattcgggcgcaccacc
gaccccgtgcgcatgtatatgcgcgaaatggggcaagtggatttgctcacccgcgaagac
gagatcaaaatcgccaaagaaattgaaaacgccttgaaaaacatgattcaagccatttca
gcctgccccggttcaatcggtgagattttagatttaatcaaccaaatcaaaaaagacgaa
atcaaagtggacgaagtggtggaagccatcatcgaccccaacgaagtcttgctcaacgaa
ctgggcttagggcatctggaaagcagcctgaacagccatcaagccgcatccggcgatgaa
agcgacgaaagcgacggcgacgaaagcggcgatgacgacgacagcgaaggcgacagcgcc
gccatagaaagccaaaacttggaagaactcaaagcccaagttttagaccacttcaaacaa
attgaaaaaagctacaacctgatgattcgcgcgttagacaaaagcggcagcagcagcgca
aaatacttggaacatcgcggcaacatcgccaacaaattgcttgaagtgcgcttttccacc
cgccaaattgaaaaattgagcgacagcctgcgctcgcgcgtagaaaaaattcgcaagcta
gaacgcgaaatccgcgacatctgcctagaccgcgtgaacatggacagagaccatttcatc
gcccacttcctgcccaacgccaccaatttggactggattgaagaagaaatcgccaaaaaa
cgcgcatggagcgaaacgctcgaccgcttccgccatgccattttggaaaaacaaaccgaa
atggccgagctggaacagcacgcgcgcgtatccatcgccgagctgaaagacatcagcaaa
aacatggtgaaaagcgaaaaagaaaccgccgccgccaagcaaaaaatgattcaggcgaac
ttgcgtttggtaatttccattgccaaaaaatacaccaaccgcggcttgcagttccttgat
ttgattcaggaaggcaacatcggcttgatgaaagcggtggacaaattcgagtaccgccgc
ggttataagttttccacttatgccacttggtggattcgccaagcgattacgcgctccatc
gccgaccaagcgcgcaccatccgcatcccggttcacatgattgaaacgattaacaaaatg
aaccgcatttcgcgccaatatctgcaagaaacaggcgaagaccccgattctgcaaaactg
gcggaattgatggaaatgcccgaagacaaaatccgcaaaatcatgaaaatcgccaaagag
ccgatttccatggaatcaccgattggcgacgatgacgacagccacttgggcgactttatc
gaagacgtgaacaatgttgcgcctgccgaagcggcgatgtattcgagcctgcgcgaagta
accgccggcgtattggaaagcctgaccccgcgcgaagcaaaagtgttgcggatgcgcttt
ggcattgatatgaacaccgaccacacgctggaagaagtgggcaaacagtttgacgttacg
cgcgagcgcatccgccaaattgaagccaaagcattgcgcaaattgcgccaccctacgcgc
tccgataagctgaaaagcttcttggacagcgaagaaggaaaataa
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