Kingella oralis: H3L93_03370
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Entry
H3L93_03370 CDS
T06724
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
koa
Kingella oralis
Pathway
koa02020
Two-component system
koa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
koa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H3L93_03370 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H3L93_03370 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
koa03021
]
H3L93_03370 (rpoN)
Transcription machinery [BR:
koa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H3L93_03370 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_21
WSD
Motif
Other DBs
NCBI-ProteinID:
QMT43391
LinkDB
All DBs
Position
630600..631961
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AA seq
453 aa
AA seq
DB search
MSSTNIQLKLRQTQQLSQNMQQSLRVLQMSGIEIEREVEDWLADNPLLDRVEQPEKTYEP
PQTTADIAKRGVSLDDDDSSAWENLAQEETLNAYLHKQVAEHPLTPSEAARVHILIDFLD
DKGYLTESIEEIIEHTPLEWMLEEDDMEIALEHLRAFDPAGIATPDLTQSLLYQLDRLPL
SEARRCAAQIITRHLDQITQNTPKNLNRFSKLLPEYSETVLRDALEIITNLRPYPSYGFA
SEEPTQYVRPDVFVQKNDKGEWYAISNEESLPQIKINTEIIEALQEESNLDPIWREKING
AKQKIDMLQQRKSTILRVAEYILAHQQDFFYFGEIGLVPMLLKDCAKHLELAESTISRAV
SNKYLACPQGLFALRYFFSQNAAINDSETGNAISANAIKSVIAQIVEHEDKTKPHSDCSL
HRLLQQQGINIARRTVAKYREQLGIPTVQQRRE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccaacatccaactcaaactcaggcaaacccagcagcttagccaaaacatg
cagcaatcgctgcgcgttttgcaaatgtcgggtattgaaatcgagcgcgaagtggaagac
tggctggcggacaaccctttgcttgaccgcgtagagcagcctgaaaaaacctacgagccg
ccccaaaccaccgcagacatcgccaaacgcggcgtgagcttggatgacgacgacagcagc
gcgtgggaaaacctcgcccaagaagaaacgctcaacgcctatctgcataaacaagttgcc
gaacacccgctcaccccatccgaagccgcccgcgtgcatattctgattgattttttggac
gacaaaggctatctcaccgaatccatagaagaaatcatagaacacaccccgctggaatgg
atgctggaagaagacgacatggaaatcgcgctggaacacctgcgcgcgtttgaccccgca
ggcatcgccacccccgatttaacccaatcgctgctctatcagcttgaccgcctgccgcta
tccgaagcacgccgttgcgccgcgcaaatcatcacccgccatctagaccaaatcacccaa
aacacgcccaaaaatctcaaccgattcagcaaattgctgcccgaatacagcgaaaccgtg
ttgcgcgacgcgctggaaatcatcaccaacctgcgtccctatccctcttacggctttgcc
agcgaagaacccacccaatacgttcgccccgatgtgttcgtgcaaaagaacgacaagggc
gagtggtatgccatcagcaacgaagaatcgctgccgcaaatcaaaatcaacaccgaaatc
atcgaagccctacaagaagaaagcaacctagacccgatttggcgcgaaaaaatcaacggc
gcaaaacaaaaaatagatatgctgcaacagcgcaaaagcaccatcttgcgcgttgccgaa
tacatccttgcccatcaacaagacttcttctattttggcgagataggcttagtgcccatg
ctgcttaaagactgcgccaagcatcttgaactcgccgaatccaccatctcccgcgccgtg
agcaacaagtatctggcttgcccgcaaggattatttgcgctgcgctattttttcagccaa
aatgcagccatcaacgacagcgaaacaggcaacgccatcagcgccaacgccatcaaatcc
gtgattgcgcaaatcgttgaacatgaagacaaaacgaagccccacagcgattgctcactg
catcgcttgctgcaacagcaaggcatcaacatcgcgcggcgcacggttgccaaataccgt
gaacaactgggcatccccaccgtgcaacaacgccgagaataa
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