Kingella oralis: H3L93_04760
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Entry
H3L93_04760 CDS
T06724
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
koa
Kingella oralis
Pathway
koa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
koa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H3L93_04760 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koa03400
]
H3L93_04760 (recD)
Enzymes [BR:
koa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H3L93_04760 (recD)
DNA repair and recombination proteins [BR:
koa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H3L93_04760 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
UvrD-helicase
AAA_22
AAA_16
SLFN-g3_helicase
nSTAND3
DEAD
SRP54
AAA_28
T2SSE
NTPase_1
ResIII
AAA_5
TrwB_AAD_bind
AAA
NPHP3_N
DO-GTPase1
ATPase
AAA_7
CbiA
FtsK_SpoIIIE
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QMT43641
LinkDB
All DBs
Position
891201..892904
Genome browser
AA seq
567 aa
AA seq
DB search
MNITDTPDTDSIPAAQSVNRLFAQIAPAAAETVAPFVERLFAALSHGNTFIYISQAEADA
LAQAAPLVGSDASSPVVLHGRRLFIAKYWHLEKQLAAEIQRLSAHTPRQPEKPLAELLAN
WFADDTSRDQRAAAALALLKNFVLISGGPGTGKTTTVAKLLALLHRQPAPRTALVAPTGK
AAARLTESLHRASAAIPDLDAEAQRYLASLTGQTVHRLLGLKPPQMQPEYHAHNPLPLDC
VLIDEASMMDNHLLYQLLAALPSHCRVILLGDADQLPSVGAGAVLDALSHNHQMQPETTT
ALRQLLPDVEHFPTLAEQHARLTISHRFHAQSGIGNLARAVQQGSASAWHAIAEHPNELF
AQPRNLAALVAQLYQHHTAYWQAIRAGNLAAAFAEQSRLIVLTALRHDAEHINNLYRTLL
QQHGHTRPQSPWYAGQIIMITRNAPSQQLYNGDIGIIMQPENDGNDLRACFPSESANGSG
YRSIPLSRLPEHETAYAITTHKSQGSEYEQVWFAAPAQAPYSRALLYTAITRAKQQFVYW
GDEAGFQAACAHNEHRNSALGMFLKEG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaccgacacccccgacaccgattccatccccgccgcccaatccgtgaaccgc
ctgttcgcgcaaatcgcgcctgccgccgccgaaaccgttgcgccgtttgtggagcgcctg
tttgccgcgctgtcgcatggcaacacgtttatctacatcagccaagcggaagccgacgcg
ctcgcccaagccgcgccgctggtgggcagcgatgccagcagccccgttgtgttgcacggc
aggcggctgttcatcgccaaatactggcatctggaaaaacagctcgccgccgaaatccaa
cgcctctccgcgcacacgccaaggcagcctgaaaaacccctagccgaattgcttgccaac
tggtttgccgacgacaccagccgcgaccaacgtgccgccgccgcgcttgccctgctgaaa
aatttcgtgctgattagcggcgggccgggtacaggcaaaaccaccaccgttgccaagctg
ctcgccctgctgcaccgccagcctgcgccgcgcaccgcccttgtcgcgcccacgggcaaa
gccgctgcccgcctaaccgaatcgctgcaccgcgccagcgccgccatccccgatttggat
gccgaggcgcaacgctacctcgccagcctcacagggcaaaccgtgcaccgcctgctgggc
ttaaagccgccgcaaatgcagcctgaataccacgcccacaacccgctgccgctggattgc
gtgttgattgacgaagcctcgatgatggacaaccacctgctgtatcaactgctcgccgcg
ctgcctagccattgccgcgtgattttgctgggcgatgccgaccaactgccatctgttggc
gcgggcgcggtgctggatgcgctgagccacaatcatcagatgcagcctgaaaccaccacc
gcgctgcgccaactgctgcccgatgtggaacactttcccacgcttgccgaacaacacgcg
cggctcaccatcagccaccgtttccacgcccaaagcggcatcggcaacctcgcccgcgcc
gtgcaacaaggcagcgcaagcgcgtggcacgccatcgccgagcatcccaacgaacttttc
gcccagccgcgcaacctcgccgcgctcgttgcccagctttatcaacaccataccgcctat
tggcaagccatccgcgcaggcaatctcgccgctgccttcgccgaacaaagccgcctaatt
gtgctcaccgcgctgcgccacgatgccgagcacatcaacaacctttaccgcaccctgctg
caacaacacgggcacacccgcccccaatcgccgtggtatgcggggcaaatcatcatgatt
acccgcaacgcccccagccaacagctctacaacggcgacatcggcatcatcatgcagcct
gaaaacgacggcaacgacctgcgcgcctgcttccccagcgaaagcgcaaacggcagcggc
taccgcagcatcccgctcagccgcctgcccgaacacgaaaccgcctacgccatcaccacc
cacaaaagccaaggctcggaatacgagcaagtgtggtttgccgcccccgcgcaagcccca
tacagccgcgccttgctctacaccgccatcacccgcgccaaacagcaatttgtgtattgg
ggcgacgaagccggttttcaggctgcctgcgcccacaacgaacaccgcaacagcgcgttg
gggatgtttttgaaagagggatga
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integrated database retrieval system
