Kingella oralis: H3L93_08610
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Entry
H3L93_08610 CDS
T06724
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
koa
Kingella oralis
Pathway
koa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
koa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H3L93_08610 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koa03400
]
H3L93_08610 (ruvB)
Enzymes [BR:
koa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H3L93_08610 (ruvB)
DNA repair and recombination proteins [BR:
koa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H3L93_08610 (ruvB)
RecFOR pathway proteins
H3L93_08610 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_22
AAA_3
Rad17
AAA_14
AAA_16
AAA_2
AAA_18
GGDEF_2
nSTAND3
AAA_17
TsaE
ABC_tran
RNA_helicase
DUF815
NTPase_1
AAA_28
AAA_24
AAA_33
Cytidylate_kin
PEPCK_ATP
Motif
Other DBs
NCBI-ProteinID:
QMT42072
LinkDB
All DBs
Position
1613270..1614301
Genome browser
AA seq
343 aa
AA seq
DB search
MLQTDNLTTSTQPRLIAAQNLSAQEEQLERALRPKTLADYIGQHKAKEQLAIFIAAAKKR
SEALDHSLLFGPPGLGKTTLANIIARELGVNLRQTSGPVLERAGDLAALLTNLEPHDVLF
IDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSVKIDLPPFTLIGATTRAGMLTNPL
RDRFGIVARLEFYETRDLATIVARSAQLLGMDLDEHGALEIARRSRGTPRIANRLLRRVR
DYAEVKHTGSITAPIADAALSMLDVDKIGLDMMDRKFLEAVLHKFSGGPVGLDNIAAAIG
ESTDTIEDVIEPYLIQQGFLQRTPRGRMATAGAFEHFGLTAPE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaaccgacaaccttaccaccagcacccaaccccgcctcatcgccgcgcaaaac
ctctccgcccaagaagagcagctagaacgcgccctgcgccccaaaaccctagccgactac
atcgggcaacacaaagccaaagaacagcttgccatctttatcgccgccgccaaaaagcgc
agcgaagcgctggatcacagcctgctgtttggccccccagggttaggcaaaaccacgctg
gcgaacatcatcgcgcgcgagttgggcgtaaacctgcgccaaacctcgggccctgtgctg
gaacgcgcaggcgatctcgctgccctgctcaccaacctagaaccgcacgacgtgctgttt
atcgacgaaatccaccgcctcagccccgtggtagaagaaatcctctaccccgccatggaa
gactatcagctagacattatgataggcgaaggccctgccgcccgctccgtcaaaatagac
ctgcccccgttcaccctcatcggcgcaaccacccgcgcaggtatgctcaccaaccccctg
cgcgaccgcttcggcatcgtagcccgcttggaattttacgaaacccgcgatttagccacc
atcgtcgcccgctccgcccaactgctgggcatggatttagacgaacacggcgcattagaa
atcgcccgccgcagccgaggcaccccccgcattgccaaccgcctgctgcgccgcgtgcgc
gactacgccgaagtcaaacacacaggcagcatcaccgcccccatcgccgatgccgccctc
tccatgttagacgtggacaaaatcgggctggacatgatggacagaaaattcctagaagcc
gtgttgcacaaattcagcggcggccccgttggactagacaacatcgccgccgccatcggc
gaatccaccgacaccatagaagacgtgattgaaccctaccttattcaacaaggctttttg
cagcgtaccccgcgcgggcgcatggcaaccgccggcgcatttgaacatttcggcttaacc
gcgcccgagtaa
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