Kingella oralis: H3L93_09510
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Entry
H3L93_09510 CDS
T06724
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
koa
Kingella oralis
Pathway
koa03030
DNA replication
koa03430
Mismatch repair
koa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
koa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3L93_09510 (dnaE)
03430 Mismatch repair
H3L93_09510 (dnaE)
03440 Homologous recombination
H3L93_09510 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
koa03032
]
H3L93_09510 (dnaE)
03400 DNA repair and recombination proteins [BR:
koa03400
]
H3L93_09510 (dnaE)
Enzymes [BR:
koa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H3L93_09510 (dnaE)
DNA replication proteins [BR:
koa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H3L93_09510 (dnaE)
DNA repair and recombination proteins [BR:
koa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H3L93_09510 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QMT42232
LinkDB
All DBs
Position
complement(1785980..1789450)
Genome browser
AA seq
1156 aa
AA seq
DB search
MTPIPLRAHSEFSITDSIIRISDYVAAARAENYPALALTDLMNTFGLLKFYKACRKAGIK
PICGADVRIENPEQPEKPHRAVLLIRNEQGYIRLNELLTAAFEADDRNKHTPQINQAWLA
QGDNSGLLCLSGAQMGEVGSHLMLGNEDKAHAAAQKYAAWFPNAFYLELQRLPEKPDWEI
SVSGSLKIAQALQLPVVATHPTQFLQREDYKAHDARVCIAGGWTLIDPKRPHDFTPGQHF
LTPDEFAARFADIPEALANSQEIAKRCNLTLTLGKNFLPLFPTPDGMDLNDYLRHLANEG
LQERLAVLYPNEAERAQRQPEYQARLDFELDIIIKMQFPGYFLIVQDFINWAKNNGCPVG
PGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPERVSMPDFDIDFCQANRGRVIEYVR
EKYGKQAVSQIVTFGAMSSKAVIRDVGRVLQLPFALCDRLSKLIPLEANKPLHLKDALAA
EPEIEQIIREEEADELLNLAMKLEDLTRNLGMHAGGVLIAPSKISDFCGVYQADENASPV
SMFDKGDVEEIGLVKFDFLGLRNLTIIEMAQNFIRQTTGEHVDVSHIPLDDQVAYKIFRD
ANTTAVFQFESSGMKKMLAQANTTNLEEIIAFVSLYRPGPMDLIPDFIERMKGAKFEYMH
PLLEPVLEPTYGIMVYQEQVMQAAQVIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEG
AAKQGISREKADEIFDYMEKFAGYGFNKSHAAAYAYVSYQTAWLKAHYPAEFMAATMSSE
LDNTDQLKVFFDDAQSKLNGIRFLPPDVNESFYRFIPNAQKQIRYALGAIKGTGEAAVNA
IVAARESGGKFTDLFDFCERVGKQHANRRVLEALIRGGAFDSIEPNRAMLLGNIDLAIAQ
AEQKADNANQGGLFDMVEDALADVPLQYIEPWNEATKLAEEKQAIGFYLSGHPFAPYASE
VRAFAPTPLGSLKAKDGTQRLAGFATSIRSIMTKNGKMIAVLLEDDTAKQEVIIRGDLLD
GIPKETLKADQILICDCSVREDRFNPDGGLRVNVANIGSDEQKQAGIHRLNEARSRFAIS
LTLNLRPEHDIDALAKLLRPHTQANGNKIPLILTYTNERAHGTLLPNAKWRLVLSNELLD
SLVAMLGERAVATRFM
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgacccccatccccctacgcgcccactccgaattttccatcaccgacagcatcatccgc
atcagcgattatgtcgccgccgcccgcgccgaaaactatcccgccctcgctctcaccgac
ctgatgaacacctttgggctgctcaaattctacaaagcctgccgcaaagcaggcatcaag
cccatttgcggcgcagatgtgcgtatagaaaaccccgagcagcctgaaaagccccatcgc
gccgtgctgctgattcgcaacgaacaaggctacatccgcctcaacgaactgctcaccgcc
gcctttgaagccgacgaccgcaacaaacacaccccgcaaatcaaccaagcctggctcgcc
caaggcgacaacagcggcctgctgtgcctatcgggtgcgcagatgggcgaagtgggcagc
catttaatgctgggcaacgaagacaaagcccatgccgccgcgcaaaaatacgccgcatgg
tttcccaacgccttttatttggaactgcaacgcctgcccgaaaaacccgactgggaaatc
agcgtttcaggcagcctgaaaatcgcccaagccctgcaactgcccgtagtcgccacccat
cccacccaatttttgcaacgtgaagattacaaagcccacgatgcccgcgtgtgcatcgca
ggtggctggacgctcattgaccccaaacgcccgcacgacttcactcccggccagcatttt
ctcacccccgatgagtttgccgcccgcttcgccgatatccccgaagccctagccaacagc
caagaaatcgccaaacgttgcaatctcacgctcacgctgggcaaaaacttcctgccgctg
ttccccacgcccgatggcatggatttgaacgactacctgcgccatcttgccaacgaaggc
ttgcaagagcgactagccgtgctctatcccaacgaagccgagcgcgcccaaaggcagcct
gaataccaagcgcggctggattttgagctagacatcatcatcaaaatgcagtttccgggt
tactttcttatcgtgcaagacttcatcaactgggcgaaaaacaacggctgccccgttgga
ccggggcgcggctcgggcgcaggctcgctggtggcgtattcgctcaaaatcaccgaccta
gacccgctcaaatacgcgctgctgtttgaacggtttttgaaccccgagcgcgtgtccatg
cccgactttgatattgacttctgccaagccaaccgcgggcgcgtgattgaatatgtgcgc
gaaaaatacggcaaacaagccgtcagccaaatcgtaacctttggcgcgatgtcgtccaaa
gccgtgatccgcgatgtggggcgcgtgctgcaactgccgtttgccctgtgcgaccgcttg
tccaaactgattccgctggaagccaataagccgctgcatctgaaagacgcactcgccgcc
gagcccgaaatcgagcaaatcatccgcgaagaagaagccgatgagctgcttaatcttgcc
atgaagctggaagatttaacccgcaatctggggatgcacgcgggcggcgtgttgattgcg
ccaagcaaaatttccgatttttgcggcgtgtaccaagccgatgaaaacgcctcgcctgtg
tctatgtttgacaagggcgatgtggaagaaattgggctggtgaaatttgactttttgggg
ctgcgcaacctcaccatcattgaaatggcgcaaaacttcatccgccaaaccacaggcgag
cacgtggatgtgagccatatcccgctggacgaccaagttgcctacaaaattttccgcgat
gccaacaccaccgccgtgttccagtttgaatccagcggcatgaaaaaaatgctggcgcaa
gccaacaccaccaatttggaagaaatcatcgcctttgtgtcgctgtatcgccccggcccc
atggatttgattcccgactttattgagcggatgaaaggcgcgaagtttgaatatatgcac
ccgctgctggaacctgtgttagagccaacctacggcattatggtgtatcaagagcaggtg
atgcaggcggcgcaagtcatcggtggctattcgctgggcggtgcggatttgctgcgccgc
gcgatgggcaagaaaaagcccgaagagatggtgaaacaccgcgaaatttttgccgaaggc
gcagcaaaacaaggcatcagccgcgaaaaagccgatgaaatttttgactacatggaaaaa
tttgcgggctacggcttcaacaaatcgcacgcggcggcgtatgcctatgtgtcgtatcaa
accgcgtggctcaaagcgcattatcccgccgaatttatggcagcaaccatgtcatccgag
ctagacaacaccgaccagctcaaagtgttttttgatgacgcgcaaagcaagctcaacggc
atccgctttttgccgcccgatgtaaacgaatcgttttaccgctttatccccaacgcgcaa
aaacaaatccgctacgcgctgggtgcaatcaaaggcacaggcgaagcggcggtcaacgcc
attgttgccgcgcgagaaagcggcggcaagttcaccgatttgtttgatttttgcgaacgc
gtgggcaaacagcacgccaaccgccgcgtgctggaagcgctgattcgcggcggcgcgttt
gacagcatagagcccaaccgcgccatgctgctgggcaatattgaccttgccatcgcccaa
gccgagcaaaaagccgacaacgccaaccaaggcggcttgtttgacatggtggaagacgcg
ctggcggatgtgccgctgcaatacattgagccgtggaatgaagccaccaagctcgccgaa
gaaaagcaagccattggtttttatttgagcgggcatccgtttgcaccctatgccagcgaa
gtgcgcgcctttgcgcccacgccattaggcagcctgaaagccaaagacggcacgcaacgg
ctggcaggctttgccacctccatccgcagcatcatgaccaaaaacggcaaaatgattgcc
gtgctgctggaagacgacaccgccaagcaagaagtcatcatccgcggcgatttgctggac
ggcatccccaaagaaacgctcaaagccgaccaaatcctgatttgcgattgcagcgtgcgc
gaagaccgcttcaaccccgatggcggcttgcgcgtgaacgtggccaacatcggcagcgac
gagcaaaagcaagccggcatccaccggctcaacgaagcccgctcccgctttgccatcagc
ctcacgctcaacctgcgccccgaacacgatattgacgcccttgccaaactgctgcgcccg
cacacccaagccaacggcaacaaaatcccgctgattttgacctacaccaacgaacgcgcc
cacggcaccttgctgcccaacgccaaatggcggctggtgttgagcaacgaattgctggat
agcttggtggcgatgctgggcgagcgagctgtagcaacgcggtttatgtaa
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