Kingella oralis: H3L93_09555
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Entry
H3L93_09555 CDS
T06724
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
koa
Kingella oralis
Pathway
koa03410
Base excision repair
koa03430
Mismatch repair
koa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
koa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H3L93_09555 (recJ)
03430 Mismatch repair
H3L93_09555 (recJ)
03440 Homologous recombination
H3L93_09555 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koa03400
]
H3L93_09555 (recJ)
DNA repair and recombination proteins [BR:
koa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
H3L93_09555 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
H3L93_09555 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H3L93_09555 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QMT42239
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Position
1796995..1798707
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AA seq
570 aa
AA seq
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MSHTKRIATRPINPQLQSALQAAGANPLIAQLYAARNVADSSELNDSLKQLIPYTQLTNC
TAAASRLADAIQAQQKILIIADYDADGATACSVAMKGLASMGAAVDFFVPNRFEHGYGLT
PELADIAHAKGADLIVTVDNGISSAEGVARAKALGLDVIVTDHHIAGSVIPDCIIVNPNQ
RGCTFPSKSIAGVGVIFYVLIALRAELRARDYFSGCRAIAEPKLDELLDLVALGTVADVV
PLDHNNRILVSQGLKRIRAGKMSHGIRALFQTARCSAQKAQPFDFGYKIAPRINAAGRLD
DMSIGIACLLSGSLNEAESMASELNELNQTRQEIEQEMLTDILADCPSALPSEQTTLCVY
RDSFHQGVVGIVASRLKEKFYRPVFVFAPDDDGNYRGSGRSIAGVHLRDVLDAISKHAPE
IIIKFGGHAMAAGLTLRSGSLKTFGDLFEDIVRSQVNEDTLSQTFLTDGSLKASDITLAN
AQLINAQIWGQGFPPPSFADTFQVLRQQSMGADKKHTKAWLTKEGQEFEAMFWRCEDTLP
RDIRVVYRPTVNEWRGNTELQLYVDYWEAA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacaccaaacgcatcgccacccgccctatcaacccccagcttcaatccgccctg
caagccgcaggcgcaaacccgctcatcgcccagctttacgccgcgcgcaacgttgccgac
agcagcgaactcaacgacagcctcaaacagcttatcccctacacccagctcaccaactgc
accgccgccgccagccgccttgccgatgccatccaagcgcagcaaaaaatcctgattatt
gccgattatgatgccgacggcgccaccgcgtgcagcgttgccatgaaagggctggcgagc
atgggcgcggcggtggatttttttgtgcccaaccgctttgaacacggctatgggcttacc
cccgagcttgccgacatcgcccacgccaaaggcgcagatttaattgttaccgtggacaac
ggcatcagcagcgccgaaggcgtggcgcgcgccaaagcgttggggctggatgtcatcgtt
accgaccaccacatcgcaggcagcgtcatccccgactgcattattgtgaaccccaaccaa
cgcggttgcaccttccccagcaaaagtatcgcgggcgtaggcgtgattttttatgtgttg
attgcgctgcgtgccgaattgcgcgcgcgggattacttttcaggctgccgtgccatcgcc
gagcccaaattagacgaattattagaccttgtggcactcggcacagtcgctgatgtcgtg
ccgctggatcacaacaaccgcattcttgtgtcgcaaggtttaaaacgcattcgcgcgggc
aaaatgagccacggcatccgcgccctgttccaaaccgcccgatgcagtgcgcaaaaagcg
cagccgtttgactttggctacaaaatcgcaccgcgcatcaacgccgcagggcggctggat
gatatgtctatcggcatcgcctgcctgctttcaggcagcctgaacgaagccgaaagcatg
gcaagcgagctgaacgaactcaaccaaacgcgccaagaaattgagcaagaaatgctcacc
gacatccttgccgattgccccagcgccttgcccagcgaacaaaccacgctgtgcgtgtac
cgcgacagctttcatcaaggcgtagtcggcattgttgccagtcgtttgaaagaaaaattt
taccgccccgtgtttgtgttcgcgcccgacgacgatggcaactatcgcggctcggggcgc
agcatcgcgggcgtgcatctgcgcgatgtgttggatgccatttccaagcacgcgcctgaa
atcatcatcaaatttggtgggcacgcgatggcggcagggctcacgctgcgttcaggcagc
ctgaaaacctttggcgatttgtttgaagacatcgtgcgcagccaagtgaacgaagatacg
ctctcgcaaacctttctcaccgacggcagcctgaaagccagcgacatcacgcttgccaac
gcccagctcatcaacgcgcaaatttgggggcaaggcttcccgccgcccagcttcgccgac
acgtttcaagtgctccgccagcaaagcatgggcgcagacaaaaaacacaccaaagcatgg
ctcaccaaagaagggcaagagttcgaagccatgttttggcgatgcgaagacacgctgccg
cgcgacatccgcgtggtgtaccgccccacagtaaacgaatggcgcggcaacaccgaattg
cagctttatgtggattattgggaggcggcgtag
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