Kingella oralis: H3L93_09855
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Entry
H3L93_09855 CDS
T06724
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
koa
Kingella oralis
Brite
KEGG Orthology (KO) [BR:
koa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
koa03009
]
H3L93_09855 (rlmD)
Enzymes [BR:
koa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
H3L93_09855 (rlmD)
Ribosome biogenesis [BR:
koa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H3L93_09855 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
MTS
Methyltr_RsmB-F
RrnaAD
Methyltransf_11
PCMT
Methyltransf_32
Met_10
Methyltransf_23
Methyltransf_15
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
QMT42291
LinkDB
All DBs
Position
complement(1847913..1849226)
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AA seq
437 aa
AA seq
DB search
MNPAYITSLDYESRGVAKLNGKTIFVNNALPQEIAQIRITQDKAHFAEAQVEQIVQPSPY
RRAPACPHYGDCGGCTMQHVEFTAQVAMKQRVFEEQLQRIGKVQPESLLPPVYGTPWHYR
SRTRLAVHTSANGKVVLGYQAKRSHKIVGINQCLLLPEHVSGCLGIIHDALQDMVNVQPK
VGIRSVEISVGEGVTAVNIVSQKRQPENVLCALSGCLNRGAGGKTVWQVWQQIGNAKPQA
VSPHDAPPLVFRLPEFGLTMPFQLGDFTQINLPLNEIMVARAVRYLDPQPHERIADLFCG
LGNFTLPLAKRAAEVVGIEGSAALTQRAVANARANGLPNAQFASADLFAATPETLAALGR
FDKMLLDPPRAGAFAVVQALHAPYLPQRIVYISCNPATLARDAAVLASKGYRFATAGMMN
LFPQTSHVEAIGVFERV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgcctacatcacttctttagattatgaatcgcgcggcgttgccaagctcaac
ggaaaaaccatctttgtaaacaacgcgctgccgcaagaaatcgcgcaaattcgcatcacg
caagataaagcccattttgccgaagcacaagttgagcaaattgtccagccatcgccctat
cggcgcgcgcccgcttgcccgcattatggcgactgcggcggctgcacgatgcaacacgtt
gaatttacggcgcaagttgccatgaagcagcgcgtgtttgaagagcagttgcagcgcatt
ggcaaggtgcagcctgaaagcctgttgccgcctgtttacggcacgccgtggcattaccgc
agccgcacgcgtttggcggtgcacaccagcgcgaacggcaaggtggttttgggctaccaa
gccaagcgcagccacaaaattgtgggcatcaaccaatgtttgctgctgcccgagcacgtt
tcaggctgcctcggcatcatccacgatgcgctgcaagatatggtgaatgtgcagccaaaa
gtaggcattcgcagcgtggaaatcagtgtgggcgagggggttacggcggtgaacatcgtc
agccaaaaaaggcagcctgaaaacgtgttgtgcgcgctttcaggctgcctcaatcgcggc
gcgggcggtaaaacagtttggcaagtgtggcaacaaataggcaacgcgaaaccgcaagcc
gtgtcgccgcacgatgcgccgccgctggttttcaggctgcctgagtttggcttgaccatg
ccgtttcagctgggcgatttcacccaaatcaacctgccgctcaacgagattatggtggcg
cgcgcggtgcgttatcttgacccgcagccgcacgagcgcatcgccgatttgttctgcggg
ctgggcaatttcacgctgccgctggcaaagcgcgctgccgaagtagtcggcattgaaggc
agcgccgccctcacgcaacgcgctgttgccaacgcccgcgcaaacggcttgccgaacgcg
caatttgccagcgccgatttgttcgccgccacgcccgaaaccctcgccgcgctggggcgg
tttgacaaaatgctgctggacccgccgcgcgcgggcgcgtttgccgtggtgcaagccttg
cacgcgccgtatttgccgcagcgcattgtgtatatttcgtgcaaccccgccacgctggcg
cgggatgcggcggtgttggcgagcaaaggctatcgctttgccacggcggggatgatgaat
ttgtttccgcaaaccagccatgtggaagcgattggcgtgtttgaacgggtgtag
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