Kingella oralis: H3L93_10445
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Entry
H3L93_10445 CDS
T06724
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
koa
Kingella oralis
Brite
KEGG Orthology (KO) [BR:
koa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
koa03032
]
H3L93_10445 (gyrB)
03400 DNA repair and recombination proteins [BR:
koa03400
]
H3L93_10445 (gyrB)
Enzymes [BR:
koa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
H3L93_10445 (gyrB)
DNA replication proteins [BR:
koa03032
]
Prokaryotic type
DNA Topoisomerases
H3L93_10445 (gyrB)
DNA repair and recombination proteins [BR:
koa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H3L93_10445 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
GyrB_insert
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QMT42391
LinkDB
All DBs
Position
complement(1963112..1965517)
Genome browser
AA seq
801 aa
AA seq
DB search
MTQQTNQEYGAASIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMVFEVLDNAIDEALAGYC
DRITVAINADESITIEDNGRGIPTGIHPKEGRSAAEVIMTILHAGGKFDNNSYKVSGGLH
GVGVSVVNALSYWLKLTIWREGKEHFVEFKRGETVAPLKAIGAAQPENRHGTRVQFLASE
DTFGTVEYKFETLAKRIRELSFLNNGVRIELFDKRDGKHEDFAESGGVQGFVQYITGSKK
PLHSKIFYALGEKDGMTVECAMQWNESYQESVQCFTNNIPQRDGGTHLTALRQAMTRTIN
QYIADNDIAKKAKVDTSGDDMREGLTCVLSVKLPDPKFSSQTKDKLVSSEISPVVNEVLG
EALKNFLEENPNDAKIICGKIVEAARAREAARKARELTRRKGVMDGLGLPGKLADCQEKD
PALSELYLVEGDSAGGSAKQGRDRKFQAILPLKGKILNVERARFERMLASQEVATLITAL
GTSIGKEEFNLEKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQMPELIERGYVYIAQPPL
YKAKHGKQERYLKDEMEKDEFLLGLAVDNAKIVAGSRTLEGAELTKLAKQFLRARNTIAE
ESRVIDAAVLRALIDIEPIDLSSEPAAQHAIAALLGSLKNPEIALEHIAGQDGGHFIKIT
RQLHGNVMVSYLDQKFVDSKAYQVLLKTAEQQRGLIGSEGAALHKGDAEAQHVASFEAAL
DSLLATAQKGLTMQRYKGLGEMNPEQLWETTMNPEVRRLLKVRIEDAIAADETFVTLMGD
EVEPRRAFIEANALVAQNIDA
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacaaaccaatcaagaatacggcgcagccagtatccaagtcctagaaggccta
gaagccgtccgcaaacgcccagggatgtacatcggcgacacccaagacggctcaggcttg
caccacatggtatttgaagtgctagacaacgccatcgacgaagccctagcaggctattgc
gaccgcatcaccgttgccatcaacgccgacgaatccatcaccatcgaagacaatgggcgc
ggcattcccacaggcatacaccccaaagaaggccgctccgccgccgaagtgattatgacc
attctgcacgcaggcggaaaatttgataacaacagctacaaagtgtcaggcggcttgcac
ggcgtgggcgtgagcgtggtcaatgcgctgtcctattggctcaaactcaccatttggcgc
gaaggcaaagagcattttgtcgaattcaaacgcggcgaaaccgtagcgccgctgaaagcc
atcggcgcagcgcagcctgaaaatcgccacggcacgcgcgtgcaatttctcgccagcgaa
gacacctttggcacggtggaatacaaatttgaaacgctcgccaagcgtatccgcgaactc
tcgtttttgaacaacggcgtgcgcatcgagctgtttgacaaacgagacggcaaacacgaa
gacttcgccgaatcaggcggcgtgcaaggctttgtgcaatacatcaccggcagcaaaaaa
cccttgcacagcaagattttctacgcgctgggcgaaaaagacggcatgacggtggaatgc
gcgatgcaatggaacgaaagctaccaagaatccgtgcaatgcttcaccaacaacatcccg
caacgcgacggcggcacgcacctgaccgcgctgcgccaagccatgacgcgcaccatcaac
caatacatcgccgataacgacatcgccaaaaaagccaaagtggatacctcgggcgacgat
atgcgcgaaggtttgacctgcgtgttatccgtgaaactgcccgaccccaaattctcatcg
caaaccaaagacaaactggtttccagcgaaatttcgcccgtggtaaacgaagtgttgggc
gaagccttgaaaaactttttggaagaaaaccccaacgatgccaagattatctgcggcaag
atcgtagaagccgcccgtgcccgcgaagccgcccgtaaagcccgcgaactcacgcgtcgc
aaaggcgtgatggacggtttgggtttgcccggaaaacttgctgattgccaggaaaaagac
cctgcgttatccgagctttatctggtggagggcgattcggcaggcggctccgccaagcaa
gggcgcgaccgcaaattccaagccattttgccgctcaaaggcaagattttgaacgtggaa
cgcgcccgctttgagcgcatgctcgccagccaagaagttgccacgctgattaccgcactg
ggcaccagcatcggcaaagaagaatttaacctagaaaaattgcgctaccaccgcatcatc
attatgaccgatgccgacgtggacggcgcacacattcgcacgctgctgctcaccttcttc
taccgccaaatgcccgaattgatagaacgcggctatgtgtatatcgcccagccgccgctg
tataaagccaaacacggcaagcaagagcgttatctgaaagacgaaatggaaaaagacgaa
tttttgcttgggttggcggtggacaacgccaaaatcgtggcaggcagccgcacgctggaa
ggcgcggaattaaccaaactcgccaagcaattcttgcgcgcgcgcaacaccattgccgaa
gaaagccgcgtgattgatgccgctgtgctgcgcgcactgatagacattgaaccgattgat
ttatccagcgaaccagccgcgcaacacgccattgccgcccttttaggcagcctgaaaaac
ccagaaatcgcgttggaacacatcgcagggcaagacggcgggcatttcatcaaaatcacg
cgccagctgcatggcaatgtgatggtgtcgtatttagaccagaaatttgtggacagcaaa
gcctatcaagtgctgctgaaaaccgctgaacagcaacgcggcttaatcggcagtgaaggc
gcagccttgcacaaaggcgatgccgaagcgcaacacgttgccagctttgaagccgcgcta
gacagtctgcttgccaccgcgcaaaaaggcttaaccatgcaacgctacaaaggcttgggc
gagatgaaccccgagcagctttgggaaaccaccatgaaccccgaagtgcgccgcttgctg
aaagtgcgcattgaagacgcgattgccgccgatgaaacgtttgttacactgatgggcgac
gaggttgagccgcgcagagcatttattgaagcgaatgcgctggtggcgcagaatattgat
gcgtag
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