Kingella oralis: H3L93_11635
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Entry
H3L93_11635 CDS
T06724
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
koa
Kingella oralis
Pathway
koa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
koa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H3L93_11635 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
koa03021
]
H3L93_11635 (rpoA)
03400 DNA repair and recombination proteins [BR:
koa03400
]
H3L93_11635 (rpoA)
Enzymes [BR:
koa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H3L93_11635 (rpoA)
Transcription machinery [BR:
koa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H3L93_11635 (rpoA)
DNA repair and recombination proteins [BR:
koa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H3L93_11635 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QMT42593
LinkDB
All DBs
Position
complement(2174477..2175463)
Genome browser
AA seq
328 aa
AA seq
DB search
MQNSTSEFLRPRQIDVDALSPTHAKVSMQPFERGFGHTLGNALRRILLSSMNGFAPTEVT
IAGVLHEYSTLDGVQEDIVDILLNIKGVVFKLHGGSTEAVITLKKEGSGVVTAADFELPH
DVEIINPEQVICHLAANGNIDMEVKVEQGRGYQSVAGRKAAKEQTKIGSIQLDSSFSPIS
RVSFEVEAARVEQRTDLDSLVLDIETNGSIEPEEAVRAAARILIDQMSIFADLEGTPIEV
EEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYYIGDLIQRTETELLKTPNLGRKSLN
EIKEVLASKGLTLGSKLESWPPAGLEKP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatagcacttccgaatttttgagacctcgccaaattgatgttgatgccttatca
ccaacacatgcaaaagtttctatgcaaccatttgagcgcggttttggacatactttgggt
aatgctttgcgccgtatcttactgtcatcaatgaatggttttgcaccaactgaagtaaca
attgcaggtgttttgcatgagtattccaccttagatggtgttcaagaagatattgttgat
attttattgaatattaagggtgtggtatttaagcttcatggcggtagtacagaggctgtt
attacattaaaaaaagaaggttcaggtgtagtaacagctgctgattttgagttgcctcac
gatgttgaaattatcaatccagaacaagttatttgtcatttggccgcaaatggcaatatt
gatatggaggttaaggtagaacaaggtcgtggatatcagtcggttgctggtaggaaagct
gcaaaagagcaaactaaaattggctctattcaattggactcaagtttttcacctattagc
cgtgttagctttgaagttgaagcagctcgcgttgaacaaagaacagatttagatagttta
gttttagatattgaaacaaatggctcaattgaacctgaggaagcggttcgagctgctgcc
cgaattttgattgaccaaatgtcaatatttgctgatttggaaggtacgccaattgaagtt
gaagaagaaaaagcgcctccaattgatcctgttctgttgcgccctgtagatgatttggaa
ttaaccgttcgttcagcaaactgtttgaaggcagaagatatttattacatcggtgatttg
attcaacgtactgaaactgagttgttaaaaacacctaatttgggtcgtaaatccttaaat
gagattaaggaagttttggcatctaaaggtttaactttgggttctaaactggaatcttgg
cctcccgctggattagaaaaaccctag
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