Kosakonia sp. SMBL-WEM22: HF650_04465
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Entry
HF650_04465 CDS
T08549
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
kob
Kosakonia sp. SMBL-WEM22
Pathway
kob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF650_04465 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kob03019
]
HF650_04465 (pcnB)
Enzymes [BR:
kob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HF650_04465 (pcnB)
Messenger RNA biogenesis [BR:
kob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HF650_04465 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QNQ22668
UniProt:
A0A7H0MK57
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All DBs
Position
complement(933167..934585)
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AA seq
472 aa
AA seq
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MTLPRCTIFTRVANFCRKVLSREESMAVEAMAKPQMTVIPREQHAISRKDISENALKVLY
RLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMF
GPEIIEVATFRGHHDDQQTDRTISQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVA
DFTVRDYVGGMRDLQEGTIRLIGNPETRYREDPVRMLRAVRFAAKLGMQISEETAEPIPR
LATLINDVPPARLFEESLKLLQAGYGYETYQLLREYGLFQPLFPIITRCFTERGDSPMER
IIAQVLKNTDNRIHNDMRVNPAFLFAAMFWYPLLENAQRITQEGGLAYYDAFALAMNDVL
DEACRSLAIPKRITTLVRDIWQLQLRMSRRQGKRAWKLMEHPKFRASYDLLALRAEAENN
AELQRLTKWWGEFQVSAPPAQKHMLDDLGDEPAERRRHRRPRKRAPRREGGA
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ctgacactaccgaggtgtactatttttacccgagtcgctaatttttgccgcaaggtgcta
agccgcgaagagagcatggccgttgaggcaatggccaaaccgcaaatgacggttattccg
cgtgagcagcacgctatttcccgcaaagatatcagcgaaaatgcgctcaaagtgctctat
cgtctgaataaagcgggctatgaagcatacctggtaggcggcggggtgcgcgacttgttg
ctgggcaaaaaaccaaaagattttgatgtcactaccaacgccacgccggatcaggtgcgc
aagctgttccgcaactgccgcctggtgggtcgccgtttccgcctcgcgcacgtaatgttc
gggccggagattatcgaagtggcgaccttccgtggtcatcatgacgatcagcaaaccgat
cgcaccatctcccagcgcggccagaacggcatgctgctgcgcgacaacatctttggctcg
attgaagaagatgcccagcgtcgtgactttaccatcaacagcctctactacagcgttgcc
gactttaccgtgcgtgactacgtcggcggcatgcgcgatctgcaagagggcaccatccgc
ctgatcggcaacccggaaacccgctaccgcgaagatccggtgcgcatgctgcgcgcggtg
cgattcgccgcaaaactgggcatgcagattagcgaagagaccgccgagccgatcccacgt
ctggcaaccttaattaacgacgtgccgccggcgcgtctgtttgaagagtccctcaagctg
ttgcaggccggttacggttacgaaacctaccagctgctgcgcgaatatggcctcttccag
ccgctcttcccgatcatcacccgctgctttaccgagcgcggcgacagcccgatggagcgc
attattgcccaggtgctgaagaacaccgataaccgcattcacaacgatatgcgcgttaac
ccggcgttcctctttgccgccatgttctggtatccgttgctggagaacgcgcagcgtatc
acccaggagggcgggctggcctattacgacgccttcgcgctggcaatgaacgacgtgctc
gacgaagcgtgccgctcgctggcgatcccgaaacgcatcaccacgctggtgcgcgatatc
tggcagctgcagctgcgcatgtcccgtcgccagggcaaacgtgcctggaaactgatggag
catccgaaattccgcgcctcttacgatctgctggcactgcgcgccgaggcggagaacaac
gcggaactgcagcgcctgacaaaatggtggggcgagttccaggtctctgcaccgccagcg
caaaaacatatgcttgatgatttaggtgacgagcccgccgagcgccgtcgtcatcgccgt
ccgcgcaagcgcgcgccgcgccgtgagggcggtgcatga
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