Kosakonia sp. SMBL-WEM22: HF650_06585
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Entry
HF650_06585 CDS
T08549
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
kob
Kosakonia sp. SMBL-WEM22
Pathway
kob00040
Pentose and glucuronate interconversions
kob01100
Metabolic pathways
kob02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
HF650_06585
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HF650_06585
Enzymes [BR:
kob01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
HF650_06585
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Motif
Pfam:
Pectate_lyase_2
Motif
Other DBs
NCBI-ProteinID:
QNQ22685
UniProt:
A0A7H0MK74
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Position
complement(1372998..1374707)
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AA seq
569 aa
AA seq
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MKNSSVALAVGIAALFSSQAQAQENVRLESVKAFADAVIAKASDKHHPDVPLLADGVDPR
TGKQLEWIFPDGRTAVLSNFSAQQNFMRVLVGLSELTGDPQYKKRAEDNVRYYFQHYQDE
SGLLLWGGHRFIDLNTLQPEGPSEKEQVHELKNAYPWYALMFSVDKAATARFIRAFWNAH
VYDWKILETSRHGEYGKPMGKLWASEFEQQPPFFATKGLSFLNAGNDLIYSASLLYQYEG
DQGALTWAKRLAEQYVLPRDKKTGLGVYQFTQALKRAETTDDSDTNSKYGDRAQRQFGPE
FGAAALEGNMMLKGRTSTLYSENALMQLALAKSLGNKGDDLKKWTLDGLKAFAHYAYDEK
TNTFRPMLANGTDLSGYHLKRDGYYGKKGSELKPYPAGNEFLLSYARAWTLAQDDEIWGV
ARGIARGQGLGDIGEPGGKNSRLNLQTQNSEPYTIFALIDLSQATGDKGYLTLADKVADN
ILASKRLNNFFIDDRRYVYANIDNIAPYALLALEATHRGKPDAVAPFINGAGFTEGAYLM
ADGSVRYSTRDDELFKLQAGEQLKPNGKK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatagcagtgtagcgcttgcggttggcatcgcggcgttattctcctcgcaggcg
caggcacaagaaaatgtgcggctggagagtgtgaaagccttcgctgatgcggttatcgct
aaagccagcgataaacaccatccggatgttcccctgttggccgatggcgtcgatccacgc
accggcaagcagctggagtggatctttccggatggcagaacggcggtattgtcgaacttc
tctgcgcagcaaaattttatgcgcgtgctggtcgggctgagtgagttaactggcgatccg
cagtataagaaacgcgcggaggataatgtccgttactacttccagcattatcaggatgag
agcggattactgctgtggggcgggcaccgttttatcgatctcaacacgctgcaacctgag
gggccgagcgaaaaagagcaggtgcatgagctgaaaaatgcctatccctggtatgccctg
atgttctctgtcgacaaggcggcgacggcgcgttttatacgcgccttctggaatgcgcat
gtttatgactggaaaatactcgagaccagtcgccacggtgaatatggcaaacccatgggc
aaattatgggccagcgagttcgaacagcagcccccctttttcgccaccaaagggctcagt
tttctcaatgccggtaatgacctgatctactccgcctctctgctctatcaatatgagggc
gatcagggcgcgctgacctgggcaaaaaggctggcagagcagtatgtcctgccgcgcgat
aagaagaccgggcttggcgtttatcaattcacccaggcgcttaaacgtgcggaaaccacc
gatgatagcgacaccaactcgaagtatggcgaccgcgcgcagcgtcaatttggcccggag
tttggcgcggcggcgctggaggggaatatgatgctgaaaggcagaaccagcaccctctac
tcggagaatgcgttaatgcagctggcgctggcaaagtcgctgggcaataaaggggatgat
ctcaaaaaatggacgctggatggtctgaaggcttttgctcattacgcctacgatgagaaa
accaatacttttcggccaatgctggcaaacggcaccgatctctcgggctatcacctgaaa
cgtgacggttattacggtaaaaagggcagtgaattgaagccctacccggcgggcaacgag
tttctgctctcttatgcccgtgcctggacgctggcgcaggatgatgagatctggggagtg
gcgcgcggcattgcgcgcggtcaggggcttggcgatattggtgaaccgggcggtaaaaac
agccggctcaatctgcagacgcaaaatagcgagccgtacactattttcgcgctgattgat
ttgtcgcaggcaacgggtgataaaggctatctcacgctggcagataaggtggcagacaat
attttagccagcaaaaggctgaacaacttcttcatcgacgatcgccgctatgtttacgcc
aatatcgacaacattgccccttatgcgctgctggcgctcgaagccacgcatcgcggtaag
cctgacgccgttgccccctttattaatggcgcaggcttcaccgaaggcgcctatctgatg
gcggatggcagcgtgcgctactccacccgtgatgatgagctatttaagttacaggcaggc
gagcaactgaagccgaacggcaaaaaatag
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