Kosakonia sp. SMBL-WEM22: HF650_07275
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Entry
HF650_07275 CDS
T08549
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
kob
Kosakonia sp. SMBL-WEM22
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kob03400
]
HF650_07275 (phrB)
Enzymes [BR:
kob01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HF650_07275 (phrB)
DNA repair and recombination proteins [BR:
kob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HF650_07275 (phrB)
Prokaryotic type
HF650_07275 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Flg_hook
Motif
Other DBs
NCBI-ProteinID:
QNQ19570
UniProt:
A0A7H0MBA9
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All DBs
Position
1519730..1521142
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AA seq
470 aa
AA seq
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MTTHLVWFRTDLRVHDNLALAAACRSAKATVKALFIATPKQWQQHLMAPRQAALIEAHLN
ALQQSLAERGIELIYREVDDFAASVQAIAEVCQQEQVSHLFYNYQYELNERQRDAAVEKA
IPDVACQGFDDSVMLAPGSVMTGNREMFKVFTPFKNAFLRRLKEDLPECVAAPQPREGGA
LKVEPLSLNYLQQPFDEKLFPPDEKQAIARLRHFCQHQVAEYEQQRDFPSIEGTSRLSAS
LAIGALSPRQCLHRLLAEQPDVLEGGPGAVWLSELIWREFYRHLITYHPALCKHRPFIAW
TEKVQWQDNPQHLEAWKKGMTGYPIVDAAMRQMNETGWMHNRLRMITASFLIKDLLVDWR
VGERYFMAQLVDGDYAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDAEGEFIRRWLP
ELKTVPPKAIHQPWVWADKQGVKLDYPRPIVDHKQARSATLAAYEAARKG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatctggtctggtttcgcacggatttgcgcgtgcatgataacctcgcgctg
gcggcggcctgccgtagcgcgaaggcaacagtaaaagccctctttatcgccacgccgaag
cagtggcagcagcacctgatggcgccgcgccaggctgcactgattgaggcccatcttaat
gcacttcagcagtcactcgccgagcgcggcattgagcttatctaccgcgaagtggatgac
tttgccgccagcgtgcaggcaatcgctgaggtctgccagcaggagcaggtgagccacctt
ttttataactatcagtacgagctcaatgagcgccagcgcgatgcggcggtggagaaagcg
atccccgacgtcgcctgccaggggtttgatgacagcgtgatgctggcaccgggcagcgtg
atgaccggcaatcgcgagatgtttaaagtcttcaccccctttaaaaatgcctttttgcgc
cgtctgaaagaggatctgcccgagtgcgtcgctgcgccgcagccgcgcgagggcggggcg
ctgaaggtggaaccgctgtcgctcaactacctgcaacagccctttgacgaaaagcttttc
ccgcctgatgagaagcaggccattgcccgcctgcgccacttctgccagcaccaggtggca
gagtatgagcagcagcgtgatttcccctctattgagggtactagccgtctctccgccagc
ctcgccatcggcgcgctctctccgcgccagtgtctgcaccgcttgctcgctgaacagcca
gatgtgctggagggtgggccgggcgcggtatggctgagcgagttaatctggcgtgaattt
tatcgccatctcatcacctaccatccggcgttgtgcaagcatcgcccatttattgcatgg
acggagaaggtgcagtggcaggataacccgcagcatctggaagcgtggaaaaaggggatg
accggttatccgattgtcgatgcggcgatgcgccagatgaatgagaccggttggatgcat
aatcgtctgcgtatgattaccgccagcttcctgatcaaagacctgcttgtcgactggcgg
gtgggagagcgctattttatggcgcaactggtggatggcgattacgcggcgaacaacggc
ggctggcagtgggcggcctcaaccggcaccgatgccgcgccctacttccgtatcttcaac
ccgaccacccagggggagcgcttcgatgcagagggcgagtttatccgccgctggctgccg
gagctaaaaaccgtaccgccaaaggcgattcatcaaccctgggtctgggcagataagcag
ggcgttaagctcgattatccgcgcccaattgtcgatcataaacaggcgcgaagcgccacg
ctggcggcctatgaagccgcgcgaaaagggtaa
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