Kosakonia sp. SMBL-WEM22: HF650_08520
Help
Entry
HF650_08520 CDS
T08549
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
kob
Kosakonia sp. SMBL-WEM22
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kob03009
]
HF650_08520
Ribosome biogenesis [BR:
kob03009
]
Prokaryotic type
ribosomal protein modification factors
HF650_08520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QNQ19800
LinkDB
All DBs
Position
complement(1790961..1792721)
Genome browser
AA seq
586 aa
AA seq
DB search
MTQTFIPGKDATLEDSIARFQQKLTDLGFNIEEASWLNPVPNVWSVHIRDKECALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGDAIAQGPFVHYPNEKWFPLPEDDSLPEG
ILDARLRAYYDPENELAAGMLVDLQSGNEERGICALPFTRQSDEQTVYIPMNIVGNLYVS
NGMSAGNTRNEARVQGLSEVFERHIKNRIIAESISLPEIPQEVLARYPGVVEAIAKLEAE
GFPIFAYDGSLGGNYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDLFKQDADYPFVDWSFAGTTEEEFATLM
SIFQKEDKEVYIADYEHLGVYACRILVPGMSDIYPAEDLWLANNTMGTHLRETILSLPGS
EWDKEAYLDLIAQLDDEGHDDFTRVRELLGLATGKDNGWYTLRIGELKAMLALAGGDLDQ
ALAWTEWTIEFNASIFSPERANYYRCLQTLLLLAQEEERQPLQYLNAFVRMYGAQAVEAA
SAALSGEAPFYDLQPADGTLQAFPAHQSLLAAYEKLQRAKVAYWSK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaacatttatccccggcaaagatgccacgctggaagactccatcgctcgcttt
cagcagaaactgaccgatctcggtttcaatattgaagaggcctcctggctaaaccctgta
ccaaacgtctggtcggtgcatatccgcgataaagagtgcgcgctctgctttaccaatggt
aaaggcgcgacgaagaaagcggcgctggcttccgcgctcggcgaatatttcgaacgtctc
tccaccaactacttctttgctgacttctggcttggcgacgccattgcccaggggccgttt
gtccactatccgaatgagaagtggttcccgctgccggaagatgactcgctgccggaaggc
attctggatgcgcgtctgcgcgcctactacgatccggaaaacgagctggccgccggtatg
cttgtcgatctgcagtccggtaatgaagagcgcgggatctgcgccctgccctttacccgc
cagtcggatgagcagacggtctatatcccgatgaacatcgtcggcaacctctatgtctcc
aacggcatgtcggcgggcaacacccgtaacgaagcgcgcgtgcaggggctgtctgaagtt
tttgaacgtcatattaaaaatcgcattatcgccgagagcatcagcctgccggagatcccg
caggaggtgctggcgcgctatcctggcgttgtcgaagcgattgccaaactggaagcggaa
ggtttcccgatctttgcctacgacggctcgctgggcggtaactacccggttatctgcgtg
gtgctgttcaacccggcaaatggtacctgcttcgcctcatttggcgcgcacccggacttt
ggcgtagcgctggagcgtacggtgacggaactgctgcagggtcgcggcctgaaggatctg
gatgtctttaccccgccaacctttgatgatgaagaagtggcagagcacgctaacctcgag
acgcactttatcgactccagcggcctcatctcctgggatctgttcaaacaggatgccgat
tatccgtttgttgactggagcttcgccggcaccacggaagaggagttcgcgacactgatg
agtatcttccagaaggaagataaagaggtttacatcgcggattacgagcacctcggcgtt
tacgcctgccgtattctggtgccgggcatgtccgatatttaccctgcggaagatctgtgg
ctggcaaataacaccatgggtactcacctgcgcgaaaccatcctctctctgcctggcagc
gagtgggataaagaggcctacctcgatcttatcgcccaactggatgatgaaggtcacgat
gactttacccgcgtgcgcgagctgctgggcctggcgacgggcaaagataatggctggtac
accttgcgcatcggcgagctgaaagcgatgctggcgctggcgggcggcgatctcgatcag
gcgctggcctggaccgagtggacgattgagtttaacgcctcaatcttcagccctgaacgc
gctaactactaccgttgcctgcagacactgctcttgctggcgcaggaagaggagcgtcaa
ccgctgcaatacctcaacgcctttgtgcgtatgtatggcgcgcaggccgttgaagctgcc
agcgccgccctcagcggtgaagcgccgttctacgatctgcagcctgccgacggcacgttg
caggcgttcccggcccatcagtcgctgttagccgcttacgaaaaattacaacgtgcgaaa
gtcgcttactggtctaagtaa
DBGET
integrated database retrieval system
