Kosakonia sp. SMBL-WEM22: HF650_12005
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Entry
HF650_12005 CDS
T08549
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
kob
Kosakonia sp. SMBL-WEM22
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kob03009
]
HF650_12005 (dbpA)
Enzymes [BR:
kob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
HF650_12005 (dbpA)
Ribosome biogenesis [BR:
kob03009
]
Prokaryotic type
rRNA helicases
HF650_12005 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
Helicase_RecD
Toxin_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
QNQ20440
UniProt:
A0A7H0MDS9
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All DBs
Position
complement(2536378..2537751)
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AA seq
457 aa
AA seq
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MTAFSTLNMLPAAQIDNLNELGYLTMTPVQAAALPLILAGKDVRVQAKTGSGKTAAFGLG
VLQHIDSSRFQTQSLILCPTRELADQVASELRRLARSMPNTKILTLCGGQPFGAQRDSLQ
HAPHIIVATPGRLLDHLQKSTVSLESLQTLVMDEADRMLDMGFSDAIDEVIRFAPAQRQT
LLFSATWPEAIAAISGRVQRNPETVEIDTVDDLPAIEQQFFEVSRHGKIPLLQKLLSVHR
PASCVVFCNTKKDCQEVCDALNAAGQDALALHGDLEQRDRDQTLVRFANGSARVLVATDV
AARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGNQGLAISLCAPEEAQRANILSEML
HLKLNWLSAPANVTIAPLAAEMTTLCIDGGKKAKMRPGDVLGALTGEMGLDGADIGKITV
HPAHVYVAVRQSVARQAWKQLQNGKIKGKACRVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgctttttcaacactgaacatgctgcccgccgcccagattgataatcttaacgaa
ctgggctatctcaccatgacgccggtgcaggctgctgcgctccccctgatactggccgga
aaagatgtccgcgtgcaggcaaaaaccggcagcggtaaaacagcggcatttggtcttggc
gtattgcagcacatcgatagcagccgttttcagacccagtcgctgattttatgcccgacg
cgcgagctggcggatcaggttgccagcgaattgcgccgcctggcgcgctccatgccgaat
accaaaattttgacgctctgcggcggtcagccttttggcgcgcagcgcgattccttgcag
catgcgccacatatcatcgtcgccacgccgggccgcctgctcgatcatctgcaaaaaagc
acggtctcgctggagagcctgcaaacgctggtgatggacgaagccgatcgcatgctcgat
atgggctttagcgacgctattgatgaggtgatccgcttcgctccggcccagcgtcagacc
ttactcttttccgccacctggccggaggccatcgctgctatcagcggtcgcgtacagcgc
aacccggaaacggtggagatcgataccgttgacgatctgccggctattgagcagcaattt
tttgaagtctcccgtcacggcaaaatcccgctgttgcaaaaactgttgagcgttcaccgc
ccggcctcctgcgtggtcttctgtaacacaaaaaaagattgccaggaagtgtgtgatgcg
ctgaacgccgcaggccaggacgcgctggcgctgcatggcgatctggagcagcgcgaccgc
gaccagacgctggtgcgttttgctaacggcagcgcccgtgtactggtggcgaccgatgtc
gccgcgcgcggtctggatatcaaatccctcgagctggtcgttaattacgagctggcctgg
gacccggaggtgcacgttcaccgtatcgggcgcaccgcgcgcgccgggaatcaggggctg
gcaatcagcctttgcgcaccggaagaggcgcagcgggcgaatattctctctgaaatgctg
cacctgaagctgaactggctctctgcgccagccaatgtcaccattgcgccgttagcggca
gagatgaccacgctttgcatcgacggtggtaagaaagcaaaaatgcgtccgggcgatgtg
ctgggggcgttaacgggcgagatggggctggacggagccgatatcggcaagatcaccgtc
catccggcgcatgtctatgtcgcggtgcgacagagcgtggcgcgccaggcgtggaagcag
ctgcaaaacggcaaaatcaaaggcaaagcctgccgcgtgcgcttgttgaaataa
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