Kosakonia sp. SMBL-WEM22: HF650_17835
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Entry
HF650_17835 CDS
T08549
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
kob
Kosakonia sp. SMBL-WEM22
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kob03009
]
HF650_17835 (srmB)
Enzymes [BR:
kob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HF650_17835 (srmB)
Ribosome biogenesis [BR:
kob03009
]
Prokaryotic type
rRNA helicases
HF650_17835 (srmB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
UvrA_inter
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QNQ21459
UniProt:
A0A7H0MGP8
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All DBs
Position
3719688..3721022
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AA seq
444 aa
AA seq
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MTVTTFSELELDDSLLDALQNKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAVNTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEDPVEVSATPSTRERKKIHQWYYRADDVQHKTALLV
HLLKQPEATRTIVFVRKRERVHELATWLREAGINNCYLEGEMVQIKRNEAIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGIAISLVEAHDHLLL
GKIGRYVEEPLKARVIDELRPTSRPPSEKLNGKPSKKALAKREEKKKEKDKEKPRVKKRH
RDTKNIGKRRKPSTAGSEQQKSEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaacttgacgacagccttctggacgcgctccag
aataaaggctttacacgcccaaccgctatccaggcagctgccattccgcctgcgcttgaa
gggcgtgatgtcctcggttctgcgcccaccgggacaggtaaaaccgcagcctatttgctg
ccggcgttgcaacaccttctggactttccgcgtaagaaatccggcccgccgcgtatcctg
atcctgacgccaacccgcgagctggcaatgcaggttgccgaccacgcgcgtgaactggcg
gttaacacccatcttgatatcgccaccattaccggcggcgtggcgtatatgaaccacgcc
gaagtgttcagcgaaaaccaggatatcgtggtcgccaccactggccgcctgctgcagtat
ataaaagaagagaacttcgactgccgcgcggtcgagacgctgattcttgatgaagcggac
cgcatgctggacatgggctttgcgcaggatatcgagaccattgccggtgaaacgcgctgg
cgcaagcagacgatgctcttctctgcgacgctggaaggcgacgcaatcaaagattttgcc
gagcgtctgctggaagatccggttgaagtctccgcaaccccttcgacccgcgaacgtaag
aagatccatcagtggtactaccgtgccgatgatgtgcaacacaaaaccgccctgctggta
catctcctgaaacagcctgaagccacccgcactatcgtctttgtgcgcaagcgtgagcgt
gtgcatgagctggcaacctggctgcgcgaagcgggcattaataactgctatctcgaaggc
gagatggtgcaaataaagcgtaacgaagcgatcaaacgcctgaccgatggccgcgttaac
gtgctggtagcaaccgacgttgccgcgcgcgggattgatattcccgatgtcagccacgtg
attaacttcgatatgccgcgcagcggtgacacctacctgcaccgtatcggccgtaccggt
cgcgcagggcgcaaaggcatcgccatttccctggttgaagcgcacgatcacctgctgctg
ggcaaaattggccgttacgttgaagagccgctaaaagcgcgcgtcatcgatgagctgcgc
ccgacaagccgtccgccaagtgaaaagctgaacggcaagccgtcgaagaaagccttagcg
aagcgtgaagagaagaaaaaagagaaagataaagagaaaccgcgcgtgaagaaacgccac
cgcgataccaaaaatattggtaaacgccgcaagccgagcacggcaggcagcgaacagcag
aagagcgaagagtaa
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