Kosakonia sp. SMBL-WEM22: HF650_19330
Help
Entry
HF650_19330 CDS
T08549
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
kob
Kosakonia sp. SMBL-WEM22
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kob03016
]
HF650_19330 (truD)
Enzymes [BR:
kob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HF650_19330 (truD)
Transfer RNA biogenesis [BR:
kob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HF650_19330 (truD)
Prokaryotic type
HF650_19330 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QNQ21716
UniProt:
A0A7H0MHF5
LinkDB
All DBs
Position
complement(4006684..4007733)
Genome browser
AA seq
349 aa
AA seq
DB search
MTEFDNLTFLHGKPGGNGILKASPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHVREVSFAGQKDKHAVTEQWLCARVPGNGMPDLSQFTLEGCKVLEYARHKRK
LRLGALKGNAFTLVLREITHRAEVDARLQAIAEQGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQVVSERLKKPDFNQVVVGDALQLAGRGSWFVATDEE
RQELQARVDAKALMITAPLPGRGEWGTEEAALEFEQQAIADAPELQTLLVREKVDAARRA
MLLYPQALSWNWWDDATVEVRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatttgataacctcacctttctgcacggcaagcctggcggcaatggcatcctg
aaggccagcccggaagatttcgtcgtggtggaggatcttggcttcgagccagacggcgaa
ggtgagcatattctggtacgaattctgaaaaatggctgcaatacacgttttgttgctgac
gctctagcgaaattccttaaaattcatgtgcgtgaagtaagtttcgccggtcagaaagat
aagcatgccgtgacggaacagtggctttgcgcccgcgtaccgggtaatggtatgccggat
ctgagccagtttaccctcgaaggttgcaaagtgctggagtatgcccgccataaacgcaaa
ctgcgtctcggcgcgttgaagggcaacgcgtttacgctggtgctgcgggaaataacccat
cgcgcagaggtggacgcacgtttacaggctatcgccgaacagggcgtacccaactatttt
ggcgcacagcgttttggcatcggcggcagcaatctgcagggcgcgctgcgctgggcgcaa
agcgatgcgccggttcgcgatcgtaacaaacgcagtttttggttgtccgcagcgcgcagc
gcgttgtttaatcaggtggtcagcgagcggctgaagaaaccggacttcaatcaagttgtt
gttggcgatgcgctacaattagcgggtcgcggaagctggtttgtggcgaccgatgaagag
cgccaggagctacaggcgcgtgtcgatgcaaaagcactgatgatcaccgcgccgttgccg
ggtcgcggcgagtggggaacagaagaggcggcactggagtttgagcagcaggcgatcgct
gatgcgccagagttacagacgctgctggtaagagaaaaagtggacgctgcgcgccgtgcg
atgttgctctatccacaggcgctcagctggaactggtgggatgatgccaccgtcgaggta
cgtttctggctaccggcgggaagctttgccaccagtgtggtcagggaacttatcaacaca
tcgggtgattatgcgaatattgctgagtaa
DBGET
integrated database retrieval system
