Kosakonia sp. SMBL-WEM22: HF650_21075
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Entry
HF650_21075 CDS
T08549
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kob
Kosakonia sp. SMBL-WEM22
Pathway
kob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HF650_21075 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kob03019
]
HF650_21075 (pnp)
03016 Transfer RNA biogenesis [BR:
kob03016
]
HF650_21075 (pnp)
Enzymes [BR:
kob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HF650_21075 (pnp)
Messenger RNA biogenesis [BR:
kob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HF650_21075 (pnp)
Transfer RNA biogenesis [BR:
kob03016
]
Prokaryotic type
tRNA degradation factors
HF650_21075 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
aRib
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
QNQ22027
LinkDB
All DBs
Position
complement(4385502..4387637)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIIRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKSSKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVYGHEQQQVVIQNINDLVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDESLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPEADK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKFAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQTQPVEAPEAPQAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcattcgtaagttccaatatggtcaacacaccgtcacgctggaaacc
ggcatgatggcccgtcaggcaactgctgccgtgatggtaagcatggacgacaccgcggta
ttcgttaccgttgttggccagaaaaaagcaaaaccaggtcaggactttttcccgctgacc
gttaactatcaggagcgtacctacgctgccggtaaaatcccgggcggcttcttccgtcgt
gaaggccgtccgagcgaaggcgaaaccctgatcgcgcgtctgattgaccgtccggttcgt
ccgctgttcccggaaggtttcgtcaacgaagtgcaggttatcgcgaccgtggtctctgtt
aacccgcaggttaacccggatatcgtggcgatgattggtgcttctgctgcactctcgctc
tctggtattccgttcaacggcccaatcggcgccgcgcgcgttggttacatcaacgaccag
tacgttctgaacccgactcaggaagagctgaaatccagcaaactggacctggttgttgcc
ggtaccgaagcagctgtgctgatggttgaatccgaagctgaactgctgagcgaagatcag
atgctgggcgcagtcgtttacggccacgagcagcagcaggttgttatccagaacattaac
gatctggtgaaagaagcgggtaaaccgcgctgggactggcagccggaagcggtcaacgaa
gcgctgaacgcgcgcgttgcagcgctcgcagaatcccgtctgagcgatgcttaccgcatc
accgacaaacaggagcgttacgctcaggttgatgtgatcaaatctgaaaccatcgcgacg
ctggttgcagaagatgagagcctggacgctaacgagctgggcgaaatcctgcacgctatc
gagaaaaacgttgttcgtagccgcgtactggcaggcgaaccgcgcatcgacggccgcgaa
aaagatatgatccgtggtctggatgtgcgtaccggcgtgctgccgcgtactcacggttcc
gcactcttcacccgtggcgaaacgcaggcgctggttaccgcaaccctgggcactgcacgt
gacgcgcagaacatcgacgaactgatgggcgagcgcactgacagcttcctgttccactac
aacttccctccgtactccgtaggggagaccggtatggtcggttcaccgaagcgtcgtgaa
attggtcacggtcgtctggcgaaacgcggcgtgctggctgttatgccggaagctgataaa
ttcccgtacaccgtgcgtgtggtttctgaaatcactgaatccaacggttcctcttccatg
gcttccgtgtgcggcgcatcgctggcactgatggatgcaggcgtaccggtgaaagccgct
gttgccggtatcgcaatgggcctggtgaaagagggcgacaactttgtggttctgtctgac
attctgggcgacgaagatcacctgggcgacatggactttaaagtagccggttcccgcgac
ggtatctctgcactgcagatggatatcaaaatcgaaggcatcaccaaagagatcatgcag
gttgcgctgaaccaggcgaaaggtgcacgtctgcatatcctgggcgtgatggagcaggcg
attaacgcgccgcgtggcgatatctctgaattcgcgccgcgtatccacaccatcaagatc
aacccggacaagatcaaagacgttatcggtaaaggcggctcagttatccgtgcgctgacc
gaagagaccggcacgaccatcgaaatcgaagatgacggtaccgtgaaaatcgcagcaacc
gacggcgacaaagcgaaattcgcgattcgtcgtatcgaagagattaccgctgagatcgaa
gtgggccgcatctataacggtaaagtgacccgtattgtcgactttggtgcgtttgttgcc
attggtggcggtaaagagggtctggtgcacatttctcagatcgccgacaagcgcgtagag
aaagtgaccgactatctgcagatgggtcaggaagtaccggtgaaagttctggaagttgac
cgccagggccgtattcgtctaagcattaaagaagcaactgaacaaactcagcctgttgaa
gcgccagaagcgccgcaagcagagcagggcgagtaa
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