Kosakonia sp. SMBL-WEM22: HF650_21655
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Entry
HF650_21655 CDS
T08549
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kob
Kosakonia sp. SMBL-WEM22
Pathway
kob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HF650_21655 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kob03021
]
HF650_21655 (rpoA)
03400 DNA repair and recombination proteins [BR:
kob03400
]
HF650_21655 (rpoA)
Enzymes [BR:
kob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HF650_21655 (rpoA)
Transcription machinery [BR:
kob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HF650_21655 (rpoA)
DNA repair and recombination proteins [BR:
kob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HF650_21655 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QNQ22132
UniProt:
A0A7H0MIM1
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All DBs
Position
complement(4502976..4503965)
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLSKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASINMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactctgggt
aacgcactgcgccgtattctgctctcatcgatgccgggttgcgcggtgactgaggttgag
attgatggtgtacttcatgagtacagcaccaaagaaggcgttcaggaagatatccttgaa
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgaagttattctt
actctgagtaaatctggcattggccctgtgaccgcagccgacattacccacgacggtgat
gtcgaaatcgtcaagccgcagcatgtgatctgccacctgaccgatgagaacgcatctatc
aatatgcgtatcaaagttcagcgcggtcgtggttacgtgccggcgtctgcccgaattcat
tcggaagaagatgagcgcccgatcggccgtctgctggttgatgcgtgctacagccctgta
gagcgaattgcctacaatgttgaagcggcacgtgtggaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaatggcacaatcgatcctgaagaggcgattcgtcgtgcg
gcaaccattctggcagaacaacttgaagctttcgttgacttacgtgatgtacgtcagccg
gaagttaaagaagagaaaccagagttcgatccgattctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactatatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctt
actgagattaaagacgtgctggcctcccgtggtctgtctctgggcatgcgcctggaaaac
tggccgccggcaagcattgctgacgagtaa
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