Kosakonia sp. SMBL-WEM22: HF650_22835
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Entry
HF650_22835 CDS
T08549
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
kob
Kosakonia sp. SMBL-WEM22
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kob03000
]
HF650_22835
Transcription factors [BR:
kob03000
]
Prokaryotic type
Other transcription factors
Others
HF650_22835
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SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
NACHT
AAA_2
MCM
AAA_19
T2SSE
AAA_14
AAA_33
ATPase_2
AAA_7
GYF
ABC_tran
AAA_30
AAA_10
BrxC_BrxD
AAA_29
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QNQ22356
UniProt:
A0A7H0MJ95
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All DBs
Position
4723838..4725424
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AA seq
528 aa
AA seq
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MKRRVVIGVLGTVLDKRGKRHNRFRKWRPTVALCQQADFPVDRLELIHQPRDEGLATQTA
EDIAVISPHTEVRSHPVAIKNPWDFEEVYAAFLDFATHYPFDTDNEEYLVHITTGTHVAQ
ICWFLLTEARYLPASLLQTGPAARGANDKEVAAGVCSVIDLDLSRYATLTSRFQREQQQS
VSFLKSGIDTRNATFNRMIDQIERVALRSSAPILLTGPTGAGKSFLAKRIFQLRHARHLV
AGRLVAVNCATLRGDNAMSTLFGHVKGAFTGAQQARTGLLREADGGVLFLDEIAELGLDE
QAMLLKAIEEKTFFPFGSDKEVQSDFQLIAGTHRNMQQWVDEGRFREDLYARINMWTFEL
PGLAQRREDIAPNIEYELQRFGLEQQTQIRFDKGARERYLAFACSAQAAWRGNFRELSTS
IARMATLAEQGRITDTLVAEEIARLEYNWRGAPSTGDLPVDLETLDLFDRRQLESVVEVC
RRTHSLSEAGRELFAVSRQKKANPNDADRLRKYLARFGLSWESVRGAT
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcgggttgtgattggggtactggggacagtgctggataaacgcgggaaacgg
cataaccgctttcgcaaatggcggccgacggtggcgctctgccagcaagcagattttcct
gtcgaccgcctggagctgatccaccagccgcgcgatgaagggcttgcgacgcaaaccgca
gaggacatcgcagtgatctcgccgcacaccgaggtacgcagccatccggtggcgatcaaa
aacccgtgggattttgaagaggtctacgccgcgtttctcgatttcgctacccactaccct
ttcgataccgacaatgaagagtacctggtgcatatcaccaccgggacgcacgtggcgcag
atctgctggttcctgctcaccgaagcgcgctacctgcccgccagcctgttgcagaccggc
ccggcggcgagaggagcgaacgacaaagaggtggcggcgggcgtctgctcagttatcgac
ctcgatttgagccgctatgccacgctgaccagccgctttcagcgcgagcagcagcagtcg
gtctcgttcctgaaatcgggtatcgatacgcgcaacgccacctttaaccgcatgatcgat
cagattgagcgcgtcgcgctgcgctcctctgcgccgattctgcttaccggcccgaccggg
gcgggaaaatcatttctggcaaaacgcatctttcagctacgccacgcccgccatttagtc
gccgggcggctggtggcagtcaactgcgcgacgttgcgcggtgataacgccatgtcgacg
ctgtttggtcatgtgaagggcgcgtttaccggcgcacaacaggcgcgaaccggactgctg
cgcgaagcggatggcggggtgctgtttcttgatgagatcgcggagctggggctggatgaa
caggcgatgctgttaaaagcgattgaagagaaaacctttttcccgttcggctcggataaa
gaggtgcagagtgatttccagctgatcgccggtacccatcgcaatatgcagcagtgggtg
gatgaagggcgcttcagggaggatctctacgcgcgtatcaatatgtggacctttgaactg
ccggggctggcgcagcggcgggaggatatcgcccccaatattgagtatgagttgcaacgc
tttggccttgagcagcagacgcagattcgcttcgacaaaggggcgcgcgagcgttacctg
gcgtttgcctgctcggcgcaggcagcatggcgcggcaactttcgcgagctgagcacctcc
atcgcccgcatggcgacactggcggaacagggccgcatcaccgatacgctggtggcggag
gagatcgcacggctggagtacaactggcgcggtgcgccatcaacgggcgatcttccggtc
gatcttgagacgctggatctcttcgacagacgtcagctggagagcgtagtggaggtgtgt
cgccgcacccatagcctctctgaagcgggccgcgagctgtttgcggtctcgcggcagaaa
aaggccaaccccaacgatgccgaccggctacgtaaatatcttgcccgctttggcctgagc
tgggagagcgtgcgtggcgcaacataa
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