Kosakonia sp. SMBL-WEM22: HF650_23325
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Entry
HF650_23325 CDS
T08549
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kob
Kosakonia sp. SMBL-WEM22
Pathway
kob03420
Nucleotide excision repair
kob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HF650_23325 (uvrD)
03430 Mismatch repair
HF650_23325 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kob03400
]
HF650_23325 (uvrD)
Enzymes [BR:
kob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HF650_23325 (uvrD)
DNA repair and recombination proteins [BR:
kob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HF650_23325 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HF650_23325 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_22
DUF4391
Motif
Other DBs
NCBI-ProteinID:
QNQ22435
UniProt:
A0A7H0MJH4
LinkDB
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Position
complement(4828683..4830845)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAATRSNMLVLAGAGSGKTRVLVHRIAWLMTVENCSPFSIMAV
TFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHMDAKLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQGMYYINGQKDEGIRPHHIQSFGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLTDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTEGSNGEPISLYCAFNELDEARFVVNRIKAWQDDGGQLTQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAYERVVNTPTRGIGD
RTLDVVRQTSRERQLTLWQATRELLQEKALAGRAAGALQRFLELIDALAQETADMPLHVQ
TDRVISDSGLRAMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASISRPVSHQRMG
TPVAQSDTGYKLGQRVRHAKFGEGTVVNMEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttatctgctcgacagcctcaatgacaaacagcgcgacgccgtagcggcg
acacgcagcaatatgctggtgctggcgggagcgggaagcggcaagacgcgcgtgctggtg
caccgtatcgcatggctgatgaccgtggagaactgttcgcccttctcgattatggcggtc
acctttaccaacaaagcggcggcggagatgcgccaccgtatcggccagttgatgggcacc
acccagggcggcatgtgggtcggcaccttccacggtctggcgcaccggctgctgcgcgca
caccatatggacgcgaagctgccgcaggatttccagatcctcgatagcgaagatcagctg
cgcctgctcaagcgcctgatcaaagcgatgaaccttgatgagaagcagtggccagcgcgg
caggggatgtactacatcaacggtcagaaggatgagggcattcgcccgcaccacattcaa
agcttcggcaatccggtagagcagacctggcagaaggtctaccaggcctatcaggaggcg
tgcgatcgcgccgggctggtcgattttgcggagctgctgctgcgcgcccacgagctgtgg
ctgaacaaaccgcatattctgcagcactatcgcgaacgctttaccaatatcctggtcgat
gagttccaggatactaacaacattcagtacgcatggatccgtctgctggcgggcgatacc
ggcaaggtgatgatcgtcggcgacgatgaccagtcaatctacggctggcgcggcgcgcag
gtggagaacatccagcgcttcctcaccgattttcccggtgcgcaaaccattcgcctggag
cagaactaccgctccaccagcaatattctgagcgccgccaacgccctgattgagaacaac
aacgggcgtctggggaaaaagctgtggaccgaaggatccaacggcgagccgatctccctc
tactgcgcgtttaacgagctggatgaggcgcgttttgttgtcaatcgcatcaaagcctgg
caggacgatggcggccagctgacgcagtgcgccattctctatcgcagtaacgcccagtcg
cgcgtgctggaagaggcgttactgcaggcgagcatgccctaccgcatctatggtggcatg
cgcttcttcgagcggcaggagatcaaagatgcgctcgcctatctgcgcctgatcgctaac
cgtaacgacgacgcggcatatgagcgcgtcgttaatacgccgacgcgcggcattggcgat
cgcaccctcgacgtggttcgccagacctctcgtgagcgtcagctgacgctgtggcaggcg
acccgcgagctgttacaggagaaagcgctggcgggtcgcgcagcgggcgcgttacagcgt
tttcttgagctaattgacgcgctggcgcaggagacggcggatatgccgctgcatgtgcaa
actgaccgggtgattagcgattccggcctgcgcgcgatgtacgagcaggagaagggcgag
aaaggccagacgcgtattgagaacttagaggagctggtcaccgcaacgcgccagttcagc
tacaacgaagaagatgaggatttaatgccgctgcaggcgttcctctcccacgcggcgctg
gaagcgggcgaagggcaggcggacacctggcaggatgcggtgcagttaatgaccctgcac
tcggcgaaggggcttgagttcccgcaggtgtttattgtcggtatggaagaggggatgttc
ccgagccagatgtcccttgatgagggtggtcgtctggaagaggagcgccgtctggcctat
gtcggcgtcacgcgtgcgatgcaaaaactgaccttaacctacgcggaaacgcgtcggctt
tacggtaaagaggtttatcaccgaccttcgcgctttattggcgaactgccggaagagtgc
gtcgaagaggtgcgcttacgcgccagcatcagccgtccggtcagccatcagcggatgggc
acgccggtcgcgcagagcgatacgggttataagcttggtcagcgtgtgcgccacgccaaa
tttggcgaaggcacggtggtgaatatggaaggcagcggtgagcatagccgcttgcaggtg
gcgttccaggggcagggcattaagtggttagttgccgcctatgcgaagctagaaaccgtg
taa
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