Kosakonia sp. SMBL-WEM22: HF650_24020
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Entry
HF650_24020 CDS
T08549
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kob
Kosakonia sp. SMBL-WEM22
Pathway
kob03030
DNA replication
kob03410
Base excision repair
kob03420
Nucleotide excision repair
kob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF650_24020 (polA)
03410 Base excision repair
HF650_24020 (polA)
03420 Nucleotide excision repair
HF650_24020 (polA)
03440 Homologous recombination
HF650_24020 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kob03032
]
HF650_24020 (polA)
03400 DNA repair and recombination proteins [BR:
kob03400
]
HF650_24020 (polA)
Enzymes [BR:
kob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF650_24020 (polA)
DNA replication proteins [BR:
kob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HF650_24020 (polA)
DNA repair and recombination proteins [BR:
kob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HF650_24020 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HF650_24020 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
HHH_2
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
QNQ22555
UniProt:
A0A7H0MJU4
LinkDB
All DBs
Position
complement(4975111..4977897)
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSVGEPTGAMYGVLNMLRSLLLQYQPTHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LACEADKKGRPVLISTGDKDMAQLVTPNVTLINTMSNTILGPEEVVTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDSLYAAPEKIAELSFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVPLELTSEQLEVQQPATEELVELFKRYEFKRWTADVEAGKWLQAR
GSKPAAKPQETIVVEAEPDIPTATLSAENYVTILDEETLQSWIGKLKSAALFAFDTETDS
LDNISANLVGISFAIEPGVAAYVPVAHDYLDAPEQIPRDRALELLKPLLEDEKLLKVGQN
LKYDRGVLENYGIELRGIAFDTMLESYVLNSVVGRHDMDSLSQRWLKHKTVTFEEIAGKG
KNQLTFNQIALEEAGHYAAEDADVTLQLHLAMWPELQQHAGPLNVLQNIEMPLVPVISRI
ERNGVNIDPAVLHKHSEELTLRLAELEQKAHEIAGEAFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILQYRGLAKLKSTYTDKLPLMINPKTGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPKDYVIVSADYSQIELRIMAHLSRD
KGLLKAFAEGQDIHRATAAEVFGLPLESVSNEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKESQKYMDLYFERYPGVLEYMERTRAQAKESGYVETLDGRRLYLPDIKSSNAARRAGAE
RAAINAPMQGTAADIIKRAMIAVDAWLQQEKPRVRMIMQVHDELVFEVHKEDIEAVTKKI
HELMESSTQLDVPLLVEVGSGPNWDQAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatccccgaaaacccactcattcttgttgacggctcctcttacctctatcgc
gcgtatcatgcgtttccgcctctgactaatagcgtcggggaacccactggcgcaatgtat
ggcgtgttgaatatgctgcgcagcctgttgctacagtatcagccgacgcatgtcgccgtg
gtgtttgatgcgaagggtaagacgttccgtgatgagctgttcgaacattataaatctcac
cgcccgccaatgccggacgatctgcgagcgcagattgagccactgcatgcgatggtgaaa
gcgatgggtctgccgctgctggcggtatcgggtgttgaagcggatgacgtcatcggcacg
ctggcatgtgaagcggacaaaaaagggcgtccggtgctgatcagtactggcgacaaagat
atggcgcagctggtgacaccgaatgtcacactgatcaacaccatgtccaacaccattttg
gggccggaagaggtcgtcaccaaatatggcgtgccgccagagctgattatcgacttcctc
gcgctgatgggcgactcctccgataacatcccgggcgtacctggcgtgggcgaaaaaacc
gcgcaggcgctgttacaagggctgggcggcctggattctctgtacgccgcgccggagaag
attgccgaactgagcttccgtggtgcgaaaaccatggcggcgaagctggagcagaataaa
gaggtggcttacctctcttaccaactggcgaccatcaaaaccgacgttccgctggagctg
acgagcgaacagcttgaagttcagcagccggccaccgaagagctggtggagctctttaag
cgttacgaattcaaacgctggactgcggatgtcgaagccggtaaatggctacaggcgaga
ggcagcaagccagccgccaagccgcaggaaacgatcgtagtggaagcggagcccgatatc
ccgaccgccacactttcggcagaaaactacgtcactatccttgatgaagagacgttgcag
agctggatcggcaaactgaaaagcgcggcgctgtttgccttcgatacggaaacggacagc
ctggataacatcagcgctaatctggtcggcatctcctttgccatcgaaccgggcgtagcg
gcctatgtgccggttgcccatgactaccttgatgcaccggagcagatcccacgcgaccgc
gcactggagctgctgaagccgctgctggaagatgaaaagcttctcaaagtgggtcagaac
ctgaaatacgatcgcggcgtgctggaaaattacggcatcgagctgcgcggcatcgccttt
gataccatgcttgagtcctacgtgctgaacagcgttgttggccgtcacgatatggatagc
ctctctcaacgctggttgaagcacaaaaccgtgactttcgaagagatcgccggaaaaggc
aaaaatcagctgaccttcaaccagatcgcgctggaagaggccggacattacgcggcagaa
gatgccgatgtcacgctgcaacttcatctggcgatgtggccggagctgcaacagcacgct
ggcccgctgaatgtcttgcagaatattgaaatgccgctggtgccggtcatttcgcgtatc
gaacgtaacggcgtcaatatcgatccagcagtgctgcacaagcactctgaagagctaacc
ctgcgtctggcggagctggagcaaaaagcacatgagatcgcgggcgaagcatttaacctc
tcgtcgaccaagcagctgcaaaccattctatttgaaaagcagggcattaaaccgctgaag
aaaacgccgggcggcgcgccgtcgacttcagaagaggtgctggaggagctggcgctcgat
tacccgctgccgaaggtgatcctgcaatatcgcggcctggcgaagcttaaatcgacctat
accgataagctgccgctgatgatcaatccgaaaaccggaagagtacatacctcttatcac
caggcggtgaccgcgaccgggcgcttgtcctctaccgatcccaacctgcaaaacattcct
gtgcgtaatgaagagggacgtcgtattcgtcaggcctttatcgcgccgaaggattacgtc
atcgtctctgcggactattcgcagatcgagctgcgcatcatggcgcacctctcgcgggat
aagggcttgttgaaagcgtttgctgaaggtcaggatattcaccgcgcaacggcggcggag
gtctttggtctgccgctggagagcgtaagcaatgagcagcgccgcagcgcgaaagcgatc
aacttcggtttgatctacggcatgagcgcctttggtctgtcgcgccagctcaatattccg
cgcaaagagtcgcagaagtatatggatctctacttcgagcgctaccctggcgtgctggag
tatatggagcgcacccgggcacaggcgaaagagagcgggtacgttgaaacacttgatggc
cgccgtctctatctgccggacatcaaatcgagcaacgctgcccgccgtgcgggtgccgag
cgcgcggcgatcaacgccccgatgcagggcaccgcggcagatatcatcaaacgcgcgatg
atcgccgtcgatgcgtggttacagcaagagaagccgcgcgtgcgaatgatcatgcaggta
cacgatgaactggtgttcgaagtgcacaaagaggatatcgaggcggtcacgaagaagatc
catgaactgatggagagcagtacccaactcgatgtgccgctgctggtggaagtgggaagc
ggaccaaactgggatcaagcgcactaa
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