Klebsiella oxytoca CAV1374: AB185_06065
Help
Entry
AB185_06065 CDS
T04534
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
koc
Klebsiella oxytoca CAV1374
Pathway
koc03420
Nucleotide excision repair
koc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
koc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB185_06065 (uvrD)
03430 Mismatch repair
AB185_06065 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koc03400
]
AB185_06065 (uvrD)
Enzymes [BR:
koc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB185_06065 (uvrD)
DNA repair and recombination proteins [BR:
koc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB185_06065 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AB185_06065 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKL33492
LinkDB
All DBs
Position
complement(163299..165461)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLLSVEHCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
SGRLGKKLWTDGADGEPISLYCAFNDLDEARFVVNRIKTWQENGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLKDKVLAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPESCVEEVRLRATVSRPVSHQRMG
TPMAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttatctgctcgacagccttaatgacaaacagcgcgaagccgttgcggca
tcacgtactaacatgctggttctggcaggcgcgggcagcggtaagacgcgcgtgctggta
caccgcatcgcctggctgctgagcgttgagcactgttccccttactccattatggcggtg
acctttaccaacaaagcggcggcggaaatgcgccatcgtattggccaactgatgggtacc
acccagggcggtatgtgggtcggcactttccacggattggcgcaccggctgctgcgcgct
catcaccttgacgccaacctgccgcaggacttccagatcctcgacagcgaagaccagctg
cgcctgctcaagcgtctgattaaggcgatgaatctcgatgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggccagaaagatgaagggctgcgcccgcaccatatacag
agctacggtaacccggttgagcagacctggcagaaggtttatcaggcctaccaggaggcc
tgcgatcgggcggggctggtggatttcgccgaactgctgctgcgcgcccacgaactgtgg
ctcaacaagccgcacattcttcagcactaccgcgagcgctttaccaatatcctggtggac
gaatttcaggataccaacaacattcagtacgcgtggatccgcctgctggcgggtgatacc
ggcaaggtgatgatcgtcggcgatgacgatcagtccatttacggctggcgcggcgcgcag
gtggagaacatccagcgcttcctcaacgatttccccggcgcggaaactatccgcctcgag
caaaactatcgctcgaccagcaatatcctcagcgcggccaacgccctgattgaaaacaac
agcgggcgcctggggaaaaagctgtggaccgacggcgccgacggcgagccgatttcgctc
tactgcgcgtttaacgatcttgatgaggcgcgctttgtcgtcaaccgcatcaaaacctgg
caggaaaacggcggggcgctggagcagtgcgcgattctgtatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcaggccagcatgccgtatcgtatttatggcggcatg
cgcttcttcgaacgccaggagatcaaagatgcgctctcctatctgcgcctgatcgccaat
cgtaatgacgacgcggcctttgagcgcgtggtgaataccccgacgcgcggtatcggcgat
cgcacgctggacgtggtgcgccagacctcgcgcgaccgtcagctgacgctgtggcaggcc
tgtcgcgagctgttaaaagataaagtgcttgccggacgcgccgccagcgccctgcagcgt
tttatggaactcattgacgccctggcgcaggaaaccgccgatatgccgctgcacgtgcag
accgatcgggtgattaaagactccggcctgcgcatgatgtacgagcaggagaaaggcgag
aaaggccagacgcgcattgaaaacttagaggagctggtgacggcaacgcgccagttcagc
tacaacgaagaagatgaagatttgatgccgctgcaggcgttcctctcgcatgcggcgctg
gaagcgggagaagggcaggcggatacctggcaggatgcggtacagctgatgaccctgcac
tcggcgaaagggctggagttcccgcaggtctttatcgtcggcgtggaagaggggatgttc
ccgagccagatggcgcttgatgagggcggccgcctggaagaagaacgccgtctggcctac
gtcggcgtcacccgtgcgatgcagaagctcacgctgacctatgcggaaacccgccgcctg
tatggcaaagaggtttatcaccgtccgtcgcgctttatcggcgagctgccggagtcgtgc
gtggaagaggtgcggctgcgcgccacggtgagccgtccggtcagccatcagcggatgggg
acgccgatggcggaaaacgacaccggctataagctgggccagcgcgtgcgccatgccaag
tttggcgaaggcacgatcgtgaacctcgaaggcagcggcgaacacagccgcctgcaggtt
gcgtttcaggggcaggggattaaatggctggtcgcggcgtatgcccggcttgaaacagtg
taa
DBGET
integrated database retrieval system
