Klebsiella oxytoca CAV1374: AB185_10640
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Entry
AB185_10640 CDS
T04534
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
koc
Klebsiella oxytoca CAV1374
Pathway
koc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
koc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB185_10640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koc03400
]
AB185_10640
Enzymes [BR:
koc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
AB185_10640
DNA repair and recombination proteins [BR:
koc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB185_10640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKL34327
LinkDB
All DBs
Position
1141350..1141856
Genome browser
AA seq
168 aa
AA seq
DB search
MINDILAPDLRVVFCGINPGKSSAHTGFHFAHPGNRFWKVIHQAGFTDRLLKPEEELQLL
DTRCGITMLVERPTVQASEVELLELRDGGRELVRKMEEYQPRALAILGKQAFEKAFQVRG
VKWGKQQVTIGATEVWVLPNPSGLNRATLDKLVEAYRELDEALATRGL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgattaacgatattctggcgccggacctgagggtcgtcttttgcggtatcaatccgggg
aagtcttccgcccataccggttttcatttcgcccatccgggcaatcgcttctggaaagtg
attcaccaggccggctttaccgaccgtcttctgaaacccgaggaggaactccaactgctg
gatactcgctgcgggatcacgatgctcgtcgaacgcccgacggtgcaggccagcgaggtt
gagctgctggagctccgcgacggtggccgtgaactggtcagaaaaatggaagagtatcag
ccgcgcgcgctggcgatcctcggtaaacaggccttcgagaaagcgtttcaggtgcgcggc
gtaaaatggggcaagcagcaggtgaccattggggcgacggaagtgtgggtgctgccgaat
cccagcggcctcaaccgggcgacgctggataaactggtggaggcctaccgggagcttgac
gaggcgctggccacgcgagggctttag
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