Klebsiella oxytoca CAV1374: AB185_26860
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Entry
AB185_26860 CDS
T04534
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
koc
Klebsiella oxytoca CAV1374
Brite
KEGG Orthology (KO) [BR:
koc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
koc03009
]
AB185_26860 (rimO)
Enzymes [BR:
koc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AB185_26860 (rimO)
Ribosome biogenesis [BR:
koc03009
]
Prokaryotic type
ribosomal protein modification factors
AB185_26860 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Methyltransf_2
CLP1_P
RNase_II_C_S1
PrmA
Motif
Other DBs
NCBI-ProteinID:
AKL37294
LinkDB
All DBs
Position
4566814..4568139
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AA seq
441 aa
AA seq
DB search
MSNVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDNADMVIVNTCGFIDSAV
QESLEAIGEALKENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYAPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKR
LADAGVKELLVISQDTSAYGVDVKHRSGFHNGMPVKTSMVSLCEELAKLGIWVRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKMMKRPGSADRQLARIKQWREVCPELTL
RSTFIVGFPGETEDDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEEVKEERW
NRFMQLQQQISAERLQEKVGREIMVLIDEVDEEGAIGRSMADAPEIDGAVYLNGESKVKP
GDVVRVKVEHADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtcacccctcagccgaagatcggctttgtctctctgggctgcccgaaaaac
ctcgtggactcagaacgtatcctgactgaactgcgtaccgaaggatatgacgtagttccc
tcctacgataacgctgatatggttatcgttaacacctgcggctttatcgatagcgccgtg
caggagtcgctggaagcgattggcgaagcgttgaaagaaaacggcaaagtgatcgtcacc
ggctgcctgggcgcaaaagaagatcagatccgcgaagtgcatccgaaggtgctggaaatt
accggcccgcacagctatgaacaggtgctggaacacgtccaccactacgcgccgaagcct
aaacacaacccgttcctcagcctggtgccggaacagggcgtgaagctgacgccgcgtcat
tacgcttacttaaaaatttccgaaggctgcaaccatcgctgcaccttctgcatcatcccg
tcaatgcgcggcgatctggtcagccgtccgattggcgaagtgctggcggaagccaaacgc
ctggccgacgccggcgtcaaagagctgctggtgatctctcaggacacctccgcctacggc
gttgatgtcaaacatcgcagcggtttccacaacggtatgccggtcaaaaccagtatggtt
agcctgtgcgaagagctggcgaagctcggtatctgggtgcgcctgcactacgtctatccg
tacccgcacgtcgatgatgtaatcccgctgatggcggaaggcaaaattctgccctacctc
gatattccgctgcagcacgccagcccgcgtattctcaagatgatgaagcgtccgggctcc
gccgaccgccagctggcgcgcatcaagcagtggcgcgaagtctgcccggaactcaccctg
cgctcgacctttatcgtcggcttcccgggtgaaacggaagacgatttccagatgctgctc
gacttcctgaaggaggcccgcctcgaccgcgtcggctgcttcaagtacagcccggtggaa
ggcgcgaccgccaacgagctggcggatcaggtgccggaagaggtgaaagaagagcgctgg
aaccgctttatgcagctgcagcagcagatctccgccgagcgcctgcaggagaaagtcggt
cgtgaaattatggtgctgatcgacgaagtggatgaagaaggggcaattggccgcagcatg
gccgatgcgccggaaatcgacggcgcggtctacctgaacggtgagagtaaagtcaaaccg
ggcgacgttgtgcgggtgaaagtcgagcacgccgacgaatacgatctgtggggcagccgg
gtttaa
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