Klebsiella oxytoca CAV1374: AB185_27075
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Entry
AB185_27075 CDS
T04534
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
koc
Klebsiella oxytoca CAV1374
Pathway
koc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
koc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB185_27075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
koc03019
]
AB185_27075
Enzymes [BR:
koc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AB185_27075
Messenger RNA biogenesis [BR:
koc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB185_27075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKL37335
LinkDB
All DBs
Position
complement(4621727..4623076)
Genome browser
AA seq
449 aa
AA seq
DB search
MSFDSLGLNPEILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QHLIQKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNVRSLVVFGGVSINPQMM
KLRSGVDILVATPGRLLDLEHQNAVSLDKVEVLVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVSQLVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLHDI
ERLLKKEIPRIALAGYEPDPSIKAEPIQNGRQQQRGGGRGGQGQGRGGQGQGRGQQSAPR
RTDGEAPKARTQDGKPPRRRRPRKPAAAE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaatcctgaaatcctgcgcgccgtcgctgagcagggc
tacgttgagccaaccccaattcagcagcaggctatcccggcagtattacaggggcgcgat
ctgatggccagcgctcagaccggtaccggcaaaacggcgggatttacgctgccgctgctt
cagcatctgatccaaaaggagccgcatgctaaagggcgtcgcccggtgcgtgcgctgatc
ctgaccccaacgcgcgagctggcggcgcaaattggcgagaacgtccgtgattacagcaaa
tacctcaacgttcgctcgctggtggtgttcggcggcgtgagcattaatccgcagatgatg
aagctgcgcagcggcgtcgatatcctggtggcaacgccgggtcgtctgctggatcttgaa
catcagaacgccgtgagcctcgacaaagtcgaagtgctggtgctggacgaagccgaccgt
atgctggatatgggctttattcacgatattcgccgggtgctggcgaagctgccggccaga
cgtcagaacctgctgttctccgcaaccttctccgatgacattaaatcgctggcggaaaag
ctgctgcataacccgctggagatcgaagtcgcccgccgcaacaccgcctctgagcaggtg
agccagctggtgcattttgtcgataaaaagcgcaaacgcgagctgctgtcgcagatgatc
ggtgaaggtaactggcagcaggtgctggtctttacccgcaccaagcacggcgcaaaccat
ctggcggaacagctcaataaagacggcatccgcagcgccgctattcacggcaacaagagc
cagggcgcgcgtacccgcgcattggctgactttaaatccggcggcattcgcgtactggtg
gccaccgatatcgccgcgcgcggtctggatattgaagagctgccgcacgtggtgaactac
gagctgccaaacgtaccggaagactatgtgcaccgtatcggtcgtaccgggcgcgccgcg
gcaacgggtgaagcgctgtcgctggtttgcgttgatgaacataaactgctgcatgatatc
gaacgcttgctgaaaaaagagatcccgcgtattgccctggcgggctacgagccggatcca
tcgattaaagccgagccgattcagaacggtcgtcagcagcagcgcggcggcggtcgcggt
ggccagggtcagggccgcggtggccaggggcaaggtcgcggtcagcagtccgctccgcgt
cgtaccgatggcgaagcgccgaaagcgcgaactcaggacggtaagcctcctcgccgtcgt
cgcccgcgcaaacccgccgcggcggagtaa
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