Klebsiella oxytoca CAV1374: AB185_27200
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Entry
AB185_27200 CDS
T04534
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
koc
Klebsiella oxytoca CAV1374
Pathway
koc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
koc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB185_27200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
koc03400
]
AB185_27200
DNA repair and recombination proteins [BR:
koc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB185_27200
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB185_27200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
SBDS_domain_II
AAA_22
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AKL37359
LinkDB
All DBs
Position
complement(4646658..4648673)
Genome browser
AA seq
671 aa
AA seq
DB search
MSKPFKLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGHIESTIPR
FTVYPKTHYVTPRERIVQAMEEIKVELSERRKGLLENNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGAYELDKSGDEVVDQVVRPTGLLD
PVIEVRPVGTQVDDLLSEIRIRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITPSMAKAIGETERRREKQQAYNEEHGIVPQGLNKKVVDILALG
QNIAKTKTKGRGKSRSPVEADVVALTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQL
HQLRELFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaagctgcattctgctttccgtccctccggcgatcagccggaagcc
attcgtcgcctggaagaggggctggaagatggcctggcgcatcaaaccctgctcggggtc
accggctcaggtaaaacgtttaccatcgccaacgtcattgctgacctgcagcgtccgacg
atggtgctggcgccaaacaaaaccctggcggcgcagctatacggcgaaatgaaagagttc
ttcccggagaacgcggtggagtatttcgtctcgtactacgactactaccagccggaagcc
tacgtgccaagctcggacaccttcatcgagaaagatgcgtcggtgaacgaacatattgaa
cagatgcgtctgtcggcgaccaaagcgctgctggagcgtcgcgacgtggtggtggtggcc
tcggtctccgctatctacggtctgggcgatccggatctgtatctgaaaatgatgctgcac
ctgacggtcggcatgattatcgaccagcgcgctattttgcgccgcctggccgagctgcag
tatacccgcaacgatcaggccttccagcgcggtaccttccgcgtgcgcggcgaggtgatt
gatatcttcccggcggagtctgacgatatcgcgctgcgcgttgagctgttcgatgaggaa
gttgagcgcctgtcgctgttcgatccgctgaccggtcatattgagtcgacgatcccgcgc
ttcaccgtttatcccaaaacccactacgtcaccccgcgcgagcgcatcgtccaggcgatg
gaagagatcaaagttgaactgtcggagcggcgtaagggactgctggagaacaacaagctg
ctggaagagcagcgtctgagccagcgtacgcagttcgacctcgaaatgatgaacgagctg
ggctactgctcggggattgaaaactactcgcgctatctgtcgggccgtgggccgggcgaa
ccgccgccgacgctgtttgactacctgccggccgatggtctgctggtcatcgatgagtcc
cacgtcacgatcccgcagatcggcggtatgtaccgcggggaccgggcgcgcaaagagacg
ctggtggagtacggtttccgcctgccgtcggcgctcgataaccgtccgctcaagtttgaa
gagtttgaggccctggcgccgcaaaccatctatgtttcggcgacgccgggagcctatgag
ctggataaatccggcgacgaggtggtggaccaggtcgtccgtcctacggggctgctggat
ccggtcatcgaagtgcgtccggtaggcacccaggtcgacgatctgctctcggaaattcgc
atccgcaccgcgatcaacgagcgcgtgctggtcacgacgctgaccaaacgcatggcggaa
gatttaaccgaatatctggaagagcacggcgagcgggtgcgctacctgcactcggacatc
gacaccgtggagcgcatggagattatccgcgacctgcgcctcggcgagtttgacgtgctg
gtggggatcaacctgctgcgtgaaggtttggatatgcctgaagtttcgctggtggcgatc
ctggatgccgataaagaaggcttcctgcgctctgaacgctcgctgattcagaccattggc
cgcgcggcgcgaaatatcaacggcaaagcgattctctacggcgataaaatcaccccgtcg
atggcgaaagcgatcggggaaaccgagcgccgccgcgagaagcagcaggcgtacaacgaa
gagcacggtatcgttccgcagggtctgaataagaaagtggtcgacattctggcgctcggt
cagaatatcgcgaaaaccaaaaccaaggggcgcggcaagtctcgctcaccggttgaggcg
gatgtcgtcgcgctaacgccgaaggcgctccagcagaagattcacgagctggaagggcag
atgatgcagcacgcgcagaatctggagttcgaagaggcggcgcaaattcgcgaccagctt
caccagctgcgcgagctgtttatcgccgcttcgtag
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integrated database retrieval system
