Klebsiella oxytoca CAV1374: AB185_33780
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Entry
AB185_33780 CDS
T04534
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
koc
Klebsiella oxytoca CAV1374
Pathway
koc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
koc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AB185_33780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
koc03019
]
AB185_33780
03009 Ribosome biogenesis [BR:
koc03009
]
AB185_33780
Messenger RNA biogenesis [BR:
koc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB185_33780
Ribosome biogenesis [BR:
koc03009
]
Eukaryotic type
Pre-60S particles
RNases
AB185_33780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AKL38581
UniProt:
A0A0G3R6J8
LinkDB
All DBs
Position
complement(6101023..6101568)
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AA seq
181 aa
AA seq
DB search
MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDAQLALMDE
WNVRTHTGSGLVERVKASTQGDREAELATIEFLKKWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILDGFKKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagatgaaaacaacctgatttggatcgatcttgaaatgacggggctggatccg
gagcgcgatcgcatcatcgaaatcgccaccctggtgaccgacgcgaatctgaacattctg
gcggaagggccgaccattgcggtgcaccagtcagacgcgcagctggcgctgatggacgag
tggaacgtgcgtacccataccggcagcgggctggtggagcgggtgaaggcgagtacccag
ggcgatcgtgaagccgaactggcgactatcgaattcctcaaaaagtgggtaccggcgggt
aagtcgccgatctgcggcaatagcatcggccaggatcgccgcttcttgtttaaatatatg
cctgagctggaagcgtatttccactaccgttatctggacgtcagcacgctgaaagagctg
gctcgtcgctggaagccggaaattctcgacggctttaagaaacaaggaacccatcaggcg
atggacgatattcgcgaatcggtcgcggaactggcctactatcgcgaacactttattaag
ctttaa
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